Plantibacter sp. PA-3-X8: EAO79_15620
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Entry
EAO79_15620 CDS
T05731
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plap
Plantibacter sp. PA-3-X8
Pathway
plap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAO79_15620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plap03019
]
EAO79_15620
03016 Transfer RNA biogenesis [BR:
plap03016
]
EAO79_15620
Enzymes [BR:
plap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EAO79_15620
Messenger RNA biogenesis [BR:
plap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EAO79_15620
Transfer RNA biogenesis [BR:
plap03016
]
Prokaryotic type
tRNA degradation factors
EAO79_15620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
RNase_PH_C
KH_PNO1_2nd
KH_NusA_1st
KH_2
Motif
Other DBs
NCBI-ProteinID:
AZH84158
LinkDB
All DBs
Position
complement(3305868..3308159)
Genome browser
AA seq
763 aa
AA seq
DB search
MEGPEIKFAEAVLDNGKFGKRTVRFEAGRLAQQAQGAIAAYLDEETMLLSATSAGKHPKD
NFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVTGLRNEVQ
IVITVLSIAPGEFYDALAINAASMSTQISGLPFSGPIGAVRLALIPGQAGEADQWVAFPK
VDQLEEAVFDIIVAGRIVTDANGNEDVAIMMVEAEATENSWNLIKGGATKPDEAVVAAGL
EASKPFLKQLVKAQSELAAQAAKEIAAYPVFLPYTQESYDAVAGLAHDELVNVYQIADKI
ERQNADDALKDRVKAEITERVEAGSLDAEVLTQFSAAYKSVSKVVMRGRVLREGIRIDGR
GLTDIRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTKKRYLHH
YNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTS
MGSVCASTLSLLNAGVPLRAPVAGIAMGLISDVVDGETRYAALTDILGAEDALGDMDFKV
AGTSEFVTAIQLDTKLDGIPTSVLTGALQQAKDARTTILSVLNAAIDAPDEMAPTAPRVI
SVQIPVDKIGELIGPKGKTINSIQDETGADISIEEDGTVYIGAVDGPSAEAARAQVNAIA
NPTNPEVGEQFLGTVVKIAAFGAFVSLLPGKDGLLHISEVRKLAGGKRVENVEDVLGVGQ
KILVEITKIDDRGKLSLAPVVADEADTHGSDAASEGPEAPAEG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggtccagaaatcaagttcgccgaggccgttctcgacaacggcaagttcggcaag
cgcacggtccggttcgaagccggccgcctcgcgcagcaggcacagggcgcgatcgccgcg
tacctcgacgaggagaccatgctcctctcggccacctcggccggaaagcaccccaaggac
aacttcgacttcttccccctcacggtggacgtcgaggagcgctcctacgccgccggcaag
atccccggttcgttcttccgtcgtgagggccgcccctcgaccgaggcgatcctcgtctgc
cgcctcatcgaccggccgctgcgcccgtcgttcgtcaccggcctccgcaacgaggtccag
atcgtcatcaccgtcctctcgatcgctccgggtgagttctacgacgccctcgcgatcaac
gcggcgtcgatgtccacccagatctcgggtctgccgttctccggtccgatcggcgccgtc
cgtctcgcgctgatccccggccaggccggcgaggccgaccagtgggtcgccttcccgaag
gtcgaccagctcgaggaggccgtcttcgacatcatcgtcgccggtcgcatcgtgaccgac
gccaacggcaacgaagacgtcgcgatcatgatggtcgaggcggaagccaccgagaacagc
tggaacctcatcaagggcggcgccacgaagcccgacgaggcggtcgtcgcggccggcctc
gaggcctccaagccgttcctcaagcagctcgtcaaggcgcagagcgaactcgccgctcag
gcggccaaggagatcgcggcctaccccgtgttcctcccgtacacgcaggagagctacgac
gccgtcgccggtctcgcacacgacgaactggtgaacgtctaccagatcgccgacaagatc
gagcgccagaacgccgacgacgccctcaaggaccgcgtcaaggcggagatcaccgagcgc
gtcgaggccggttcgctcgacgccgaggtactcacccagttctcggcggcctacaagtcc
gtctcgaaggtcgtcatgcgcggtcgtgtcctccgcgagggcatccgcatcgacggccgc
ggcctgaccgacatccgtccgctcgacgccgaggtgcaggtcatcccgcgcgtccacggt
tccgcgatcttccagcgcggcgagacccagatcctgggtgtcaccacgctgaacatgctc
aagatggagcagcagatcgactcgctgtcgcccgtcacgaagaagcgctacctgcaccac
tacaacttcccgccctactcgaccggtgagaccggccgggtcggttcgccgaagcgtcgc
gagatcgggcacggcttcctcgccgagcgtgcactcgtgccggtgctgccgagccgcgag
gagttcccctacgcgatccgtcaggtctccgaggccctggggtccaacggttcgacctcg
atgggttccgtctgcgcctcgaccctgtcgctgctgaacgccggtgtgccgctccgcgca
cccgtcgccggtatcgccatgggcctcatctcggacgtcgtcgacggtgagacccgctac
gcggcgctcaccgacatcctcggcgccgaagacgccctgggcgacatggacttcaaggtc
gccggtacctccgagttcgtcacggccatccagctcgacacgaagctcgacggcatcccg
acctcggtcctgaccggtgcgctccagcaggcaaaggacgcccgcacgacgatcctctcc
gtgctgaacgcggcgatcgacgctcccgacgagatggcgccgaccgcgcctcgcgtcatc
agcgtccagatccccgtcgacaagatcggcgagctgatcggcccgaagggcaagacgatc
aactcgatccaggacgagaccggcgccgacatctccatcgaggaggacggcaccgtctac
atcggcgccgtcgacggtccgtcggccgaggccgctcgtgcccaggtcaacgcgatcgcg
aaccccaccaacccggaggtcggcgagcagttcctcggaaccgtcgtcaagatcgccgcg
ttcggcgcgttcgtctcgctgctcccgggcaaggacggcctgctgcacatctccgaggtc
cgcaagctcgccggtggcaagcgtgtggagaacgtcgaagacgtgctcggcgtcggccag
aagatcctcgtcgagatcacgaagatcgacgaccgcggcaagctctcgctcgctccggtc
gtcgccgatgaggccgacacgcacggcagcgacgctgccagcgagggccctgaggccccg
gccgaaggctag
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