Plantibacter sp. PA-3-X8: EAO79_18185
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Entry
EAO79_18185 CDS
T05731
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plap
Plantibacter sp. PA-3-X8
Brite
KEGG Orthology (KO) [BR:
plap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plap03032
]
EAO79_18185 (topA)
03400 DNA repair and recombination proteins [BR:
plap03400
]
EAO79_18185 (topA)
Enzymes [BR:
plap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAO79_18185 (topA)
DNA replication proteins [BR:
plap03032
]
Prokaryotic type
DNA Topoisomerases
EAO79_18185 (topA)
DNA repair and recombination proteins [BR:
plap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAO79_18185 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AZH85144
UniProt:
A0A3G8VHG1
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All DBs
Position
complement(3875973..3878828)
Genome browser
AA seq
951 aa
AA seq
DB search
MKSIAGYLGDDYEVLSSVGHIRDLIEPKNLPAELKKGSLGKFSVDVDNGFEPYYVVSDAK
KKTVADLKRALKNADELLLATDEDREGEAIAWHLLQVLQPKVPVSRMVFHEITKDAILAA
KDKTRPLDTDLVDAQETRRILDRLYGYEISPVLWRKVGPGLSAGRVQSAATRLVVDRERE
RLAFRAASYWDVIARFLPEADATGAPFTARLVRLDGDRVATGRDFDDLGQLKGSAVPLDE
QRATALAAALEQSKATVLSVESKPYSRRPAAPFTTSTLQQEAGRKLRFSARQTMSVAQSL
YENGYITYMRTDSPSLSKQAIDAARKQAAALYGAETVPDKARLYSGKSKNAQEAHEAIRP
SGDTFRTPSSLASTLRGNDFKLYDLIWKRTVASQMADAKGSTATITLESKTDVGRAEFTA
SGTVITFRGFLAAYEEGQDEDRNSQDDASEAKLPPLTEGQQLGIEDPEAKGHETSPPPRY
TEASLVKRLEELGIGRPSTFASIISTIIDRGYVTQRGQALIPSWVAFSVVRLLEEYFEEL
VEYDFTAEMENDLDRIAGGSVDRVDWLKGFYFGDDSGRGLRQVIDNLGDIDARRINSIVI
DDGVTLRIGKYGPYLEVTPDGPPPAEGEEAPTPRRVNLPEDLAPDELTPAKAHELIDAPV
VGDRVIGVNPTTGKEIVAKDGRFGPYITEVDPEPEAELSVDTATGEVTEPAAGAKKKAPA
KKKAAAEKPRTASLFKSMDLATIDLETALKLLDLPRVVGADPESGEEILAQNGRYGPYLK
KGTDTRSLTSEDDIFAVDLAGAVELFAQPKYGARKASSALKEFEADPESGKPIKIKDGRF
GAYVTDGVTNATIPRGEEVDDVDFERAVQLLADKRAKGPAKPKAGRKAPAKKAPAKKAPA
KKTAAAKTGTAKTAATKSATATSTARSEAAKKAAATRAANKAAAAKADAVT
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgatcgccggatatctcggtgacgactacgaggtgctgtcctcggtcggtcac
atccgcgacctcatcgagccgaagaaccttcccgccgagctcaagaagggctcgctcggc
aagttctcggtcgacgtcgacaacggcttcgagccgtactacgtcgtctccgacgcgaag
aagaagaccgtcgcggacctcaagcgcgcgctcaagaacgccgacgaactcctcctcgcg
actgatgaggaccgcgaaggcgaggccatcgcgtggcacctcctgcaggtcctgcagccc
aaggtccccgtcagccgcatggtcttccacgagatcaccaaggacgccatcctcgccgcg
aaggacaagacgcggcccctcgacaccgacctcgtcgacgcccaggagacccgccgaatc
ctcgaccgcctctacgggtacgagatctcgcccgtgctctggcgcaaggtcggccccgga
ctgagcgccggacgcgtgcagtccgccgccacccgactcgtcgtcgaccgggagcgcgag
cgcctcgccttccgcgccgcctcctactgggacgtcatcgcccgcttcctccccgaagcc
gacgccaccggagcgcccttcaccgcgcgtctcgtccggctcgacggcgaccgcgtcgcc
accggccgcgacttcgacgacctcggacagctcaagggcagtgccgtcccgctcgacgaa
cagcgggccacggcgctcgccgcagcactcgagcagtccaaggcgaccgtcctctccgtc
gagtccaagccgtactcccgccggccggcggctcccttcacgacctccacgctccagcag
gaggccggtcgcaagctccgcttctccgctcgccagacgatgagtgtcgcgcagtcgctg
tacgagaacggttacatcacgtacatgcgtaccgactcgccgtcgctgagcaagcaggcg
atcgacgcggcgcggaagcaggctgctgccctctacggtgccgagacggtgcccgacaag
gctcgcctctacagcggcaagagcaagaacgcgcaggaggcgcacgaggcgatccgtccc
tcgggcgacaccttccgcacgccgtcctcgctcgcctcgacgctccgcggcaacgacttc
aagctgtacgacctgatctggaagcgcaccgtcgcaagccagatggccgacgcgaagggc
tccacggcgacgatcacgctcgagtcgaagaccgacgtgggccgcgccgagttcaccgct
tccggtaccgtcatcaccttccgcggcttcctcgccgcctacgaagagggtcaggacgag
gaccgcaactcgcaggacgacgcgtccgaggcgaagttgccgcccctcaccgaaggccag
cagctcggcatcgaggacccggaggcgaaggggcacgagacctcgccgccgccgcgctac
accgaggccagcctcgtgaagcggctcgaggagctcggcatcgggcgaccgtccacgttc
gcatcgatcatctccacgatcatcgatcgcggctacgtgacgcagcgcggccaggcgctc
atccccagctgggtggcgttcagcgtcgtccgtctcctggaggagtacttcgaggaactc
gtcgagtacgacttcaccgctgagatggagaacgacctcgaccggatcgccggcggctcg
gtcgaccgcgtcgactggctcaagggcttctacttcggcgacgactcgggtcgcggcctg
cgtcaggtcatcgacaacctcggcgacatcgacgcccgccgcatcaactcgatcgtcatc
gacgacggggtcacgctccgcatcggcaagtacggcccgtacctcgaggtcacgcccgac
ggtccgccgccggccgagggagaggaagcaccgacgccgcgtcgggtcaacctgcccgag
gacctcgcgcccgacgagctgacgcccgcgaaggcgcacgagctcatcgacgcacccgtc
gtcggcgatcgcgtcatcggcgtgaacccgacgaccggcaaggagatcgtcgcgaaggac
ggacgcttcggcccgtacatcaccgaggtcgacccggagcccgaggcggagctctccgtc
gacacggcgaccggcgaggtgaccgagcctgctgcgggtgccaagaagaaggcccccgcc
aagaagaaggcggcggccgagaagccccgcaccgcgtcgctcttcaagtcgatggacctc
gcgaccatcgacctcgagaccgcgctcaagctcctcgacctgcctcgcgtcgtcggagcc
gaccccgagtcgggcgaggagatcctcgcgcagaacggtcgctacggtccgtacctgaag
aagggcaccgacacccggtcgctcacctccgaggacgacatcttcgcggtcgacctcgcc
ggtgccgtcgagctgttcgcacagcccaagtacggagcccggaaggcgtcgagcgccctc
aaggagttcgaggccgaccccgagagcgggaagccgatcaagatcaaggacggccgcttc
ggcgcctacgtgaccgacggcgtgaccaacgcgacgatcccgcgtggcgaggaggtcgac
gacgtcgacttcgagcgagcggtccagctcctcgcggacaagcgcgcgaagggcccggcg
aagccgaaggccggtcgcaaggctcccgcgaagaaggcacccgcgaagaaggctccggcc
aagaagaccgccgcggcgaagacggggaccgccaagacggcggccacgaagtccgcgacg
gccacgtcgaccgcccgctcggaagcggcgaagaaggctgccgcgacccgcgctgcgaac
aaggcggctgcggcgaaggccgacgccgtcacgtga
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