Candidatus Profftia lariciata: GII40_00125
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Entry
GII40_00125 CDS
T07821
Symbol
rfaG
Name
(GenBank) Lipopolysaccharide core biosynthesis protein RfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
plar
Candidatus Profftia lariciata
Pathway
plar00540
Lipopolysaccharide biosynthesis
plar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GII40_00125 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plar01005
]
GII40_00125 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
plar01005
]
Core region
GII40_00125 (rfaG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Thy1
Motif
Other DBs
NCBI-ProteinID:
UDG81349
LinkDB
All DBs
Position
complement(266079..267200)
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AA seq
373 aa
AA seq
DB search
MIIALCIYKYFPFGGLQRDFMRIAQTVADHGHYIRIYTYYWHGICPINFELIQVPVKAYT
NHSRNNQYFLWVQSHLKQYPVDRIIGFNKMPNLDIYYAGDICYAEKIENKKNFLYKLTKR
YKHYLSFEKATFAMGTKTKLLMLTNKQIVDFKKHYSTESERFFILPPSISLDRKYSQHSP
NARNIYRKKNGINENDYLVLQVGSDFTRKGVDRTIIAFAALPNNIRCKSVLFIVGQDNNK
HYKKLVRKLSGKLNIYLFLGRYDVSELMIAADILLHPAYQEAAGIVLIEAIALGLPVITT
SICGYAHYINKACCGIVIQEPYKQHILNDELYKSLINCHLRKIWASNAKYFANIQNFFSV
PKKIIDIIESNIH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgcactttgtatttataaatattttccttttggggggctacaacgagatttt
atgcgtatagctcagactgttgcagatcatggacattatattagaatttatacttattat
tggcatggcatatgtcctataaattttgaattgattcaagtacctgtcaaggcttatacg
aatcattcacgtaataatcaatattttttatgggtacaatctcatctcaaacaatatcca
gtagatcgtattattggctttaataaaatgccaaatttagatatttattatgccggtgat
atttgttatgctgaaaaaatagaaaataaaaaaaattttttgtataaattaacaaaacgt
tataaacattatttaagttttgaaaaagcaacttttgctatgggtacaaaaacaaaatta
ttaatgttaacaaataaacaaattgttgattttaaaaaacattattcaacagaatcagaa
agattttttatcttaccgccaagtatctctcttgatagaaaatatagtcaacatagtcca
aatgcacgtaatatttatcgtaaaaagaatggtataaatgaaaatgattatttagtattg
caagttggttctgattttacacgaaaaggtgtcgatcgaacaattatagcttttgctgca
ttaccaaataatatccgctgtaaatctgtattatttattgttggacaagataataataaa
cattataaaaaattagtacgtaaattaagtggtaaattaaatatttatttatttttagga
cgttatgatgtatctgaattaatgattgcagctgatatattattgcatcctgcatatcaa
gaagctgctggaattgttctgatagaagctattgctttagggttaccagtaattactaca
agtatatgtggttatgcacattatattaataaagcatgctgtggtattgttattcaagaa
ccatataagcaacatatattaaatgatgagttatacaaatcactaataaattgtcatctg
cgaaaaatatgggcgtctaatgcaaaatattttgctaatattcaaaattttttttctgta
ccaaaaaaaataatagatattattgaaagtaatattcattag
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