Candidatus Profftia lariciata: GII40_00219
Help
Entry
GII40_00219 CDS
T07821
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plar
Candidatus Profftia lariciata
Pathway
plar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GII40_00219 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plar03400
]
GII40_00219 (recD)
Enzymes [BR:
plar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GII40_00219 (recD)
DNA repair and recombination proteins [BR:
plar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GII40_00219 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
AAA_22
SLFN-g3_helicase
UvrD-helicase
nSTAND3
AAA_28
MukB
UvrD_C
AAA_29
DEAD
AAA_24
SRP54
DO-GTPase1
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_14
AAA_16
ResIII
CbiA
NTPase_1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UDG81429
LinkDB
All DBs
Position
471833..473692
Genome browser
AA seq
619 aa
AA seq
DB search
MIFDLLLRMEKKKYLRSIDIHFARLIASPKQPHLALAAALVSNYSYYGHVCLPIKNLCIE
VLIIHFPDVSSDITYFFGKLTQKQWHILLIKEETVSDGSYVAPLILQYKRLYLHRLWREE
VLVARFFTDFHVSLHDNTLLLKNILSYIFPFTTLSNDLNWQKVATSVALTRKVSVITGGP
GTGKTTTVAKLLTALVLLYPQKKLRIQLAAPTGKAAARLISTLQAIIKSINNTKTYESIP
KEAYTLHRLLGVQYNSNNMKYNCNNHLPIDVLIIDEASMIDLSMMSKIIAALPQEARLIL
LGDQDQLSSVEAGAILGNISSFAKFGFRPERAKELSMLCTNIVPAGKINPNIAVRDSICS
LKKNYRFNVNSGIHQLAMAVNAGDIVRTKNCLNGQFIDLSWMTMTCNNDYTSLIKTCVQG
YSSMLQLVHNKADVKTVLAYFMRFRLLCALREGPFGQFGLNESIEIALIKEKLININKHA
KNYQNWYNGRPVMITRNDSSLGLFNGDIGITFYNTIDNMRVYFQLADDSIKYVHPGRLSK
VETAYAMTVHKSQGSEFEHTLLVLPNYLSPLVTRELLYTAITRAKTQFTLFGQDKILTAA
ICSSQLRSSGLIKRMYLSS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgaccttcttttacgtatggagaaaaaaaaatatcttcgttctattgatata
cattttgctcgtttaatagcttctcctaagcaacctcatttagccttagccgctgctcta
gttagtaattatagttactatgggcatgtttgtttacctataaaaaacttatgcatagaa
gtattaataatacattttccagatgtttcttctgacataacatatttttttggaaagtta
actcaaaaacaatggcatatattattaattaaagaagaaacagtaagtgatggtagttat
gtggctcctcttattttacagtataaacgtttatacttacatcgtttatggagagaagaa
gtactggtagcacgtttttttactgattttcatgtatcattacatgataatacattatta
cttaaaaatattttatcttatattttcccttttacaactttatctaatgatcttaattgg
caaaaagttgctactagtgttgcattaacacgtaaagtatcagtcattacaggtggtcct
ggcacaggtaaaactacaacagtagcaaaattgcttacagcattagttcttttatatcca
caaaaaaaattacgtattcaattagctgctcctacgggcaaagctgctgctcgtttaata
tcaacattacaagcaatcattaaaagtattaataatactaaaacatatgaatctattcca
aaagaagcttatacgttgcatcgtttactaggcgttcagtataatagtaataatatgaag
tataattgtaataatcatttgcctatagatgtactcataatagatgaagcttcaatgatt
gatttatcaatgatgtctaaaattattgcagctcttccacaagaagcacgtttaattttg
ttaggtgatcaagatcaactatcttcggttgaagcaggagcaattttaggcaacatatct
agctttgctaaatttggttttcgcccagagcgtgctaaagaattatctatgttatgtact
aatatagtacctgcaggtaagatcaatccaaatattgcagtacgtgatagtatttgttca
ttaaaaaaaaattatcgttttaatgttaactctggtattcatcaattggcaatggccgtt
aatgcgggtgatattgtacgtactaagaattgtttaaatgggcagtttattgatttatct
tggatgacgatgacttgtaataatgattatactagtcttattaagacttgtgttcaaggt
tatagttcaatgttgcaattagttcataataaagctgatgtaaaaacagtgctagcatat
tttatgcgttttcgtttgttgtgtgcgttacgtgaaggtccttttggtcaatttggattg
aatgaaagtatcgaaattgcattaattaaagaaaaattaattaatattaataaacatgca
aaaaattatcaaaattggtataatggaagaccggttatgataacgcgtaatgatagttca
ctaggattatttaacggtgatattggtattaccttttacaatacgatagataatatgcgt
gtatattttcaattagctgatgattcaataaaatatgttcatcctggtcggttatcaaaa
gtagaaacagcttatgcaatgaccgtacataaatcgcagggttctgaatttgaacataca
ttattagtattacccaattatttgtcacctctagtaactcgtgaattattgtatacggca
ataaccagagctaaaactcagtttacactttttggtcaggataaaattcttacagcagca
atttgtagttctcaattacgtagtagtggtttgataaagagaatgtatctttcctcttaa
DBGET
integrated database retrieval system
