Candidatus Profftia lariciata: GII40_00265
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Entry
GII40_00265 CDS
T07821
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plar
Candidatus Profftia lariciata
Brite
KEGG Orthology (KO) [BR:
plar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plar03400
]
GII40_00265 (phrB)
Enzymes [BR:
plar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GII40_00265 (phrB)
DNA repair and recombination proteins [BR:
plar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GII40_00265 (phrB)
Prokaryotic type
GII40_00265 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UDG81473
LinkDB
All DBs
Position
complement(548176..549618)
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AA seq
480 aa
AA seq
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MNVTNVVWFRNDLRTIDNKALHEACKNPNSRVICLYIATPEQWKQHNISPRQATFIHQNL
YYLAHNLTKKNIPLFYHQCTNFAAIAQWILLFCIKHKAINLFYNKQYALNERRRDDMVTQ
SLIGVCKVQSFDDALLLPPGSVLNNHGEMYKVFSLFRKVFLQTLNHTDTCSLPSPKKRNQ
ISNVIRIQPFDYPRQQLDCKLFPAGESAALEKLHIFCCERVALYAKQRDIPSINGTSILS
PYLTIGVLSPRQCLNELLNKYPKALNLNKDSGAFIWFNELIWREFYYHLLMAYPKICCNQ
SFIDWTDNICWHNQKEHLIAWQEGKTGYPIIDAAMRQLNYIGWMHNRLRMITASFLVKDL
LINWRLGEHYFMSKLLDGDLAANNGGWQWAASSGTDAVPYFRIFNPITQGKRFDKNGTFI
RRWLPELANVPDKNIHQPYQWAIKENTVLNYPYPIIDHTIARRQTIQVFKQAKINITFKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaacaaatgtagtatggtttcgtaacgatttaaggaccattgataacaaagct
ttacatgaagcttgcaaaaaccctaattctagggttatctgtctatatattgcaactcca
gaacaatggaagcaacacaatatctctcctcgtcaggcaacatttattcatcagaattta
tattatctagcacataatttaacaaaaaaaaatattccactattttatcatcagtgtact
aattttgctgcaatagcacagtggatattacttttttgcataaaacataaagcgataaat
cttttttataataaacaatatgcactgaatgaaagaagaagagatgatatggttactcag
tctcttataggggtatgtaaagttcagtcatttgatgatgcattattacttccaccaggc
agtgttttgaataatcatggagaaatgtataaagtatttagtttatttcgtaaggttttt
ttacaaaccctcaaccatacagatacatgttctttgccatctccaaaaaaaagaaatcaa
atttccaatgttataagaatccagccatttgattatcctagacaacaattagattgtaaa
ttattccctgcaggagaatcagctgcgttagaaaaattgcatatattttgctgtgagcgt
gtagcattgtatgctaaacagagagatataccatctattaatggtactagcatattatct
ccttatttaacaattggagtgttatcaccacgtcagtgtttaaacgaattattaaataaa
tatccaaaagcattaaatcttaataaagatagcggtgcatttatatggtttaatgagctt
atttggcgagaattttattatcatttattaatggcttatcctaaaatatgttgtaatcaa
tcttttattgattggactgataatatttgttggcataaccaaaaagaacatttaatagcc
tggcaagaaggaaaaactggttatcctattattgatgcagctatgcggcaattaaattat
attggttggatgcataatagattaagaatgattacggctagttttttagttaaagattta
ttaattaactggagattaggtgaacattattttatgtctaaattattagatggagattta
gcagcaaacaatggaggttggcaatgggctgcatcttctggaacagatgcggtaccttat
tttcgtatttttaatcctatcactcaaggaaaacgttttgataaaaacggtacttttata
agacgttggcttcccgaattagctaatgtaccagacaaaaatattcatcaaccatatcaa
tgggcaattaaagaaaatacagtactaaattatccatatcctattattgatcatactatt
gcaagacgccaaactattcaagtttttaagcaagctaaaataaatataacatttaaaaaa
taa
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