Candidatus Profftia lariciata: GII40_00274
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Entry
GII40_00274 CDS
T07821
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
plar
Candidatus Profftia lariciata
Pathway
plar00541
Biosynthesis of various nucleotide sugars
plar01100
Metabolic pathways
plar01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
plar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GII40_00274 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plar01005
]
GII40_00274 (hldD)
Enzymes [BR:
plar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GII40_00274 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
plar01005
]
Core region
GII40_00274 (hldD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
ThiF
KR
TrkA_N
DUF6981
Motif
Other DBs
NCBI-ProteinID:
UDG81481
LinkDB
All DBs
Position
complement(568221..569162)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNLIKALNNIGYKNIIVVDNLKDGKKIVNLVDLEITDYIDKDEFITKI
INTNYLKKIDVIFHEGACSSTTEWDGKYMMDNNYQYSKKLLNVCLKHQIPFLYASSAAIY
GSTQQCIEDRIFENPLNVYGYSKLLFDQYVRYLLPTATSQICGFRYFNVYGPREGHKGDM
ASIVFHLNNQIHNKRDLVIFEGSDTFKRDFIYVTDIVDINLWFWEKGISGIFNCGTGHAK
SFKNIADIVCQYHNQGNISYTPLPEELKRYYQKFTKANITQLRAVGYNKKFKNVKEGIRT
YLSLLNKKSKYAI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaacaggtggcgctggaatgataggcagtaacttgataaaggcgctcaat
aacattggttataaaaatattattgtagttgataatcttaaagatggtaaaaagatagta
aatctagtagatttagaaataacagattatattgataaagatgaatttattacaaaaatc
ataaatactaattatctaaaaaaaattgatgttatttttcatgaaggagcttgctcatct
acaactgagtgggatggaaaatatatgatggataacaactatcaatactccaaaaaatta
ttaaatgtctgtttaaaacatcaaattccatttttatatgcatcctcagcagctatctac
ggttctactcagcaatgtatcgaagatcgtattttcgaaaatccattaaatgtttatggt
tattctaaattattatttgaccaatatgttcgttatctattacctacagcgacatcacaa
atttgcggttttcgttattttaacgtatatggaccacgtgaaggacataaaggtgacatg
gctagtattgtctttcatttaaataatcaaattcataataaaagagatttagtaatattt
gaaggtagtgatacttttaaacgtgattttatttatgtgactgatattgtagatattaat
ttatggttctgggaaaaaggtatttctggtatttttaactgtgggactggtcatgctaaa
tcttttaaaaatattgctgatattgtctgtcaatatcataatcaaggaaatattagttat
acccctttaccagaagaactaaaaagatattatcaaaaatttactaaagctaatattact
cagttacgagctgttggttataataaaaaatttaaaaatgttaaagaaggtattagaaca
tatctttcattactaaataaaaaatctaaatatgcgatttaa
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