Candidatus Profftia lariciata: GII40_00315
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Entry
GII40_00315 CDS
T07821
Symbol
hns
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
plar
Candidatus Profftia lariciata
Brite
KEGG Orthology (KO) [BR:
plar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plar03036
]
GII40_00315 (hns)
03400 DNA repair and recombination proteins [BR:
plar03400
]
GII40_00315 (hns)
Chromosome and associated proteins [BR:
plar03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
GII40_00315 (hns)
DNA repair and recombination proteins [BR:
plar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GII40_00315 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
PaaX_C
DUF3037
DUF4164
DUF6626
DUF1902
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
UDG81511
LinkDB
All DBs
Position
complement(662777..663184)
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQSRECILETLEELLEKLEVVVQERREEENQAQTEFKERTRKLQQ
YREMLTADGIDPNELLESIATCKTLIKAKRVTRPAKYQYINKNNEIKTWTGQGRTPAVIK
KAIEEHGKSLNDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattaaaaattctaaataacatccgtactcttcgtgcacaatctagagaa
tgtattttagaaactttagaagaactacttgaaaaattagaagtagtcgtacaggagcgt
cgtgaagaagagaaccaagctcaaacagagttcaaagaacgcacacgtaaattacaacaa
tatcgtgaaatgcttactgcagatggtattgatcctaatgaactactggagagcatagct
acttgtaaaacactgattaaagctaaaagagttacacgtccagctaaatatcagtatatt
aataaaaataacgaaattaagacttggactggtcaagggcgtaccccagcagtaataaag
aaagcaattgaagaacatggtaaatctttaaatgatttccttttataa
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