Candidatus Profftia lariciata: GII40_00339
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Entry
GII40_00339 CDS
T07821
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plar
Candidatus Profftia lariciata
Brite
KEGG Orthology (KO) [BR:
plar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plar03016
]
GII40_00339 (truB)
Enzymes [BR:
plar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GII40_00339 (truB)
Transfer RNA biogenesis [BR:
plar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GII40_00339 (truB)
Prokaryotic type
GII40_00339 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UDG81533
LinkDB
All DBs
Position
699769..700728
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AA seq
319 aa
AA seq
DB search
MSRCIQHKRSINGILLLDKHQNISSNKILQKIKYIYNANKAGHTGTLDPLAVGMLPICFG
EATKFSQFLLEAKKIYHVIAKLGQSTSTSDADGEIIEERPVSFSKIQLNYALTQLLGNST
QIPSMYSAIKYHGKPLYQYARQGIEIPRKTRNITIYKLQLINYKDNKLELEITCSKGTYI
RTIIDNLGSSLGCGAHVTYLRRVQVANYSQDKMITVEQLQKIITNAKKVNIQPNVILDSL
LLPIETVVSHLPVVNLTYVTAKQILHGQKVQLLDCSIKGMVRINIEKKCKFIGIGEVNNL
GYLVPHRLLQLVDQNTNKE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatgtatccaacataaacgttctattaatggtattcttttattggataaacat
caaaatatatcttcaaataaaattttacaaaaaataaaatatatatataatgctaataaa
gcaggacatactggtacattagatcccttagcagttggtatgttacctatttgttttggt
gaagctactaaattttcccaatttttattagaggcgaaaaaaatatatcacgttattgct
aaattaggacaaagcactagtacttctgatgctgacggagaaattattgaggaacgacca
gtatctttttcaaagatacaattaaattatgctttaactcaattacttggtaatagtaca
caaataccatcaatgtattctgctattaaatatcatggaaaaccactttatcaatatgct
cgccaaggaattgagattccacgtaaaactcgtaatattacaatttataagttacaattg
attaattataaagacaataagttagaattagagattacttgctctaaaggtacttatatt
agaacaatcattgataatttaggatcatctttaggatgtggcgcgcatgttacatatttg
cgtcgtgtacaagtggctaattattctcaagataaaatgataactgttgagcaattacag
aaaattattactaatgctaaaaaagttaatattcaacctaatgtaatacttgattcttta
ttgttgccaatagaaactgttgtatcccatttaccagttgttaatttaacatatgtaacc
gctaaacaaatccttcacggacaaaaagtacaattattagattgttctattaaaggtatg
gtcagaattaatatagaaaaaaagtgtaaatttattggtattggagaagtaaataacctt
ggttatttagttccacatcgtttattacaattagtagatcaaaatactaataaagagtga
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