Parasalinivibrio latis: NF212_05815
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Entry
NF212_05815 CDS
T11132
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
plas Parasalinivibrio latis
Pathway
plas02020
Two-component system
plas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF212_05815
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NF212_05815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plas02022
]
NF212_05815
Two-component system [BR:
plas02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
NF212_05815
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA
AAA_5
Mg_chelatase
AAA_16
HTH_23
AAA_2
MCM
HTH_29
AAA_22
HTH_28
HTH_7
HTH_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WWE59608
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Position
1:1205650..1207092
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AA seq
480 aa
AA seq
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MKDTNGKKRILMVEDTASVAALYKSYLNPLDVEVETVSTGQEALASVDRKLPQLILLDLR
LPDMSGMDVLAQVRKHNANVPVIIMTAHGSIDVAVEAMRRGAMDFLIKPCEADQLRITVN
KALKPAEEQPPNNNGREGHYHGFIGKSLPMQAVYRVIESAAPSKATVFITGESGTGKEVC
AEAVHAASPRSNAPFIAINCAAIPKDLIESELFGHVKGAFTGASSDRAGAVELADGGTLF
LDEICEMDLDLQSKLLRFIQTGAYQKVGSSHSQKVDVRFICATNRDPWEEVKSGNFREDL
YYRLHVIPLYLPPLRERGEDVLDIAHSLLALMSVEEGRNFSQFDSEVLTRFAAYSWPGNI
RQLQNIIRNIVVLNAGEKVTVDMLPPPLAENSGVNFASNFEIAELAAAANPLKETVTDGM
NGARLARKSDIEPLWLTEKKAIQAAIDVCDGNIPQAAGLLEVSPSTIYRKLQSWQNATKG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataccaatgggaaaaaaaggatcttgatggttgaggatacagcgtccgtagcg
gcgttgtacaaatcctatctcaaccctttggatgttgaagtggaaactgtttctacaggc
caggaagcgttggcgagtgtagatagaaaactgccacagttgatactgctggatctgcgc
ttgccggatatgagcggtatggatgtgttggcgcaagtgcgcaaacacaatgccaatgtg
ccggttatcatcatgactgcccatggttctatcgacgtcgctgtagaagcgatgcgccgt
ggcgccatggacttcctgatcaaaccgtgtgaagcggaccagttacggatcaccgtcaac
aaggcgctaaagccagcagaagaacagccacccaataacaatggcagggaaggccattac
catggttttatcggcaagagcttgccgatgcaggcggtgtaccgtgttattgaatccgcc
gcgccaagtaaagcaacggtgtttatcaccggcgaaagtggtaccggtaaagaggtttgt
gcagaggcggttcatgctgccagcccccgcagcaatgcgcctttcattgctatcaactgc
gcagctatacccaaagacctgatagaaagtgaattatttggtcatgtgaaaggtgcgttc
actggcgcgtccagcgaccgcgctggtgcagtggagctggctgacggcggtactttgttc
ctggacgaaatctgcgagatggaccttgatcttcagtccaaactacttcgttttatccag
accggtgcctaccagaaagtgggttcatctcactcacaaaaggttgatgtgcgctttata
tgtgctaccaaccgggacccctgggaagaagttaagtcaggaaattttcgtgaagacctt
tattaccgacttcatgtaattcccctttaccttccaccacttagagagcggggggaggat
gtcttggatattgctcactctttactggcactgatgtctgttgaagaggggagaaacttc
tctcaatttgatagcgaagtcctcacgaggtttgctgcatattcgtggccaggtaatatc
cgacagcttcaaaacataatacgaaatatcgttgttttaaatgctggtgagaaagtcacc
gtagatatgttgccaccacctcttgccgagaattctggcgttaattttgcttctaatttt
gagattgctgaactagctgctgccgcaaatccattgaaggagactgtcaccgacggaatg
aacggtgcaaggctcgcaagaaagtcagatattgagccattatggctgacagagaagaaa
gcaattcaggctgcaattgatgtgtgtgatggaaacatcccccaggcagcaggattgctg
gaagtaagtccttcaacaatatatagaaaattacaatcttggcaaaatgcaaccaaggga
tga
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