Parasalinivibrio latis: NF212_07990
Help
Entry
NF212_07990 CDS
T11132
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
plas Parasalinivibrio latis
Pathway
plas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF212_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plas03000
]
NF212_07990
03400 DNA repair and recombination proteins [BR:
plas03400
]
NF212_07990
Enzymes [BR:
plas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NF212_07990
Transcription factors [BR:
plas03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NF212_07990
DNA repair and recombination proteins [BR:
plas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NF212_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WWE60003
LinkDB
All DBs
Position
1:1680242..1681606
Genome browser
AA seq
454 aa
AA seq
DB search
MLDMTESWRRARESRDHRFDGKFFVGVVTTGIYCRPICPAKTASEENVRYFHSAVEAAGQ
GFRPCLRCRPDSAPGSNPWKGVDTTLERAVSLIDSGYLHQQSVTDLCHRLGVSDRYLRKL
FHNRLGLSPKQYSLYQQVLFAKKLLHETRLPVSEIAFAAGFNSVRRFNDSFSSALKLTPS
QVRGKTEVTAGPVSIRLAYRPPYDWDRWRVFVSARLIHGMEWLDEHTYGRTFAVEGAKGW
FIARHQNSENCFDVEIHLNQPAALFRVVKRIRRILDLDADPQSIHSHLSLIQQLGERLIP
GLRIPGAWSTYEAGIRAVLGQQVTVTAATNMVRKLVSEYGESEAERLWFPAPSALAASDI
HCLKMPGGRKQALRDLARLCSTQEGSEPENWLSIKGIGRWTVDYARMRGSGEPDIFLAGD
LGVVRKLEAMGINLDPDEGAPWRSYLTFQLWNLK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctggatatgacggaaagctggcgacgggcccgggaatcccgtgatcaccgatttgac
ggtaagttctttgttggtgtggtgacaaccggtatctactgccggccaatttgcccggcg
aagaccgccagtgaagaaaatgtgcggtattttcactctgctgttgaagctgcggggcag
gggttcagaccctgtttgcgctgccgaccggacagtgcgccaggttccaacccttggaaa
ggggtagataccacgctggagcgggccgtttccctgatcgacagcggataccttcatcaa
caatctgtcactgatctttgtcacaggcttggcgtctctgaccggtacctgagaaaactc
tttcacaaccggctgggcctttcaccaaaacagtattccctataccaacaggtactgttt
gcgaaaaaactgctgcatgaaacccgtctcccggtatcagaaattgccttcgctgcgggt
ttcaacagtgtacgccggtttaatgacagcttttcctctgcgctgaaactgacaccatcc
caagtgcggggtaagacagaagtgactgcaggcccggtttccatccggctggcataccgg
cctccttacgactgggatcggtggcgggtatttgtttcagcccggttgatccacggaatg
gagtggctggatgaacacacttatggccggacgtttgctgtcgagggggctaaaggctgg
tttattgccaggcaccagaacagcgaaaactgctttgatgttgagattcacctcaatcaa
ccggctgcgttgtttagggtagtgaaaagaatacgtcgtatcctagatctggatgccgat
ccgcaatctatccatagccatctttcattgatacaacagttgggtgagcgtttaataccc
ggacttcggattcccggggcctggagcacgtatgaagctggtataagggcggtgttgggt
caacaggttactgtgactgctgctaccaacatggtaaggaaactggtatctgaatacggc
gaatcggaggcggaacgtttatggttcccggctccatccgctcttgctgcatcggatatc
cattgccttaaaatgcccggcggcagaaagcaggcactacgcgatctggccaggctttgt
tccacccaagaaggaagtgaaccggaaaactggctttccatcaagggaataggacgctgg
acggttgattatgcacgtatgcgtggcagtggggagcctgatatatttcttgcgggtgat
ctgggggttgtgcgcaaattagaagccatggggattaatttggaccctgatgagggtgct
ccatggcgaagctatttaacattccagctttggaatctgaaataa
DBGET
integrated database retrieval system
