Parasalinivibrio latis: NF212_08425
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Entry
NF212_08425 CDS
T11132
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
plas Parasalinivibrio latis
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plas03400
]
NF212_08425
DNA repair and recombination proteins [BR:
plas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NF212_08425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DZR
SLFN-g3_helicase
AAA
AAA_22
MgtE_N
AAA_30
DUF7577
ERCC3_RAD25_C
Galanin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WWE60086
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Position
1:complement(1773412..1775190)
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AA seq
592 aa
AA seq
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MYTLRPYQSEAVRAVVHYFRKSSDPAVAVLPTGAGKSLVIAELARLARGNVLVLAHVKEL
VEQNHAKYEGYGLEGAIFSAGLGRKETNQQVIFASVQSVVRNLDAFSHAFSLLVIDECHR
VPDDENSSYRRVISHLQSVNPGLKILGLTATPYRLGLGWIYSFHTRGQVRTTDSRFFRDC
IFELPIRHLLDEGFLTEATLLDAPVLSYDFSELRPRASGFYSEKEMDEVIKRAPRATPEI
LAQIKEKAADRHGVMIFAATVRHAQEVLQLLPPEQSALVIGDTEGKERDRIIRAFKDREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNNY
DLYQPEVGDTKPDSDSEIVTIPCPACGFNNNFWGKTDDRGIVTEHYGRRCQGYFEDDDGE
REICGYRFRAKFCDDCGADNDIAARVCHQCDAQLVDPDKKLREALKLKDALIMACNEMDV
EAGKSQKGTPQLCVTYYGDDDQQLREYWPMSTKRQKTAFLDKFVRPHLIDRHRSFEDTAP
TKVEKQQHRFRAPDFIIARKSGRFWSIRDKVFDEQGILKGWLATQFAEKSGN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtataccctccgcccctaccagtccgaagcagtccgtgccgttgtgcattactttcgt
aaaagctctgatcctgccgttgccgttctcccaaccggagccggtaaaagcctggtcatt
gcagaacttgcccgtctggcaaggggaaacgtgctggtactggcccatgtgaaagaactg
gtagagcaaaaccacgcaaaatacgaaggttatgggcttgaaggggcaattttttccgcc
gggcttggcaggaaagaaaccaatcagcaggtgatctttgcctcagtgcagtcggttgtc
cgcaaccttgacgcattcagccacgctttcagcctgctggtcatcgacgagtgccaccgg
gtccccgatgatgaaaacagcagttaccgccgggttatctcacacctgcagtctgttaac
ccagggctcaagattcttggcctcacagccacgccataccgattagggctgggttggatc
tacagtttccatacccgcgggcaggttcgcaccacagacagccggttcttccgtgactgc
attttcgaactgcccatccggcacctgcttgatgaagggttcctgactgaagccaccctg
cttgatgctcccgtactgagctatgatttttctgaacttcgccccagggcctccggcttt
tactcagaaaaagaaatggatgaggtaatcaaacgtgcgccaagggcaacgcctgaaata
ctggcacagataaaagaaaaagccgctgaccggcacggtgtaatgatttttgctgccacc
gtccgccacgcccaggaagtgttgcagttgttgccgccagagcaatcggcattggtcatc
ggggatacagaaggcaaagagcgggatagaatcattcgtgccttcaaagaccgggaaatt
aaataccttgttaatgtatccgttctgacaacaggctttgatgcacctcacgtcgatctc
atcgccatactcagaccaaccgaatctgtaagcctttaccagcaaattgtggggcggggg
ctgcgactgtcccccggtaaaactgactgcctgatactggattatgccggaaacaattac
gatctttaccaaccggaagtcggggataccaagccggacagcgattcggagatagtcacc
atcccctgcccggcctgcgggttcaacaacaatttctggggaaaaacagatgaccggggc
attgtcaccgaacactatggacgtcgctgccagggctattttgaggatgatgacggcgaa
cgtgagatttgcggctaccgtttcagggcgaagttttgcgatgattgtggtgcggacaac
gacattgctgcccgggtgtgtcaccaatgcgatgcacaactcgtcgatccggataaaaaa
ctgcgggaagcgttaaagctgaaagacgccttgataatggcatgcaatgaaatggatgta
gaagccggtaaatcccagaaaggtacgccacaattgtgtgtgacttattacggagacgat
gaccagcaactgcgggaatactggccgatgtctaccaaacgccagaaaactgcctttctg
gataagtttgtccgcccgcaccttattgaccggcacaggtcgtttgaagacaccgcaccg
acaaaagtggaaaaacagcagcaccgtttccgggccccggactttattattgcgcggaaa
tcaggccgtttttggtccattcgggacaaggtttttgatgagcagggcatactcaaaggc
tggctagctacccaatttgccgaaaagtccggcaattaa
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