Parasalinivibrio latis: NF212_10750
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Entry
NF212_10750 CDS
T11132
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plas Parasalinivibrio latis
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plas03032
]
NF212_10750 (topA)
03400 DNA repair and recombination proteins [BR:
plas03400
]
NF212_10750 (topA)
Enzymes [BR:
plas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NF212_10750 (topA)
DNA replication proteins [BR:
plas03032
]
Prokaryotic type
DNA Topoisomerases
NF212_10750 (topA)
DNA repair and recombination proteins [BR:
plas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NF212_10750 (topA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WWE57424
LinkDB
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Position
1:complement(2341282..2343900)
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AA seq
872 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTGASTGGKKATPVSTKGLSPEE
KQRIKQEKERNALINKMGVDPYKGWKAKYEVLPGKEKVVSELKTLAEKADTVYLATDLDR
EGEAIAWHLREIIGGDDSRYKRVVFNEITKNAIKQAFEAPGELNQDRVNAQQARRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVRLLVEREHEIKAFIPQEYWDIHSDTASAAGEAL
RLMVTHQSGTAFKPVNETQAMAAASLLEKAAYTVKDREDRPTTSKPSAPYITSTLQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSKEAVEAARGYIEGNYGKNYLPDAAIA
YGSRGNAQEAHEAIRPSDVNVQADTLEGMEPDAHRLYDLIWRQFVSCQMVPAKYDSSTLT
VEAGEFTLKAKGRTLRFDGWTRVQRPSGKNEDVTLPSVAVGEQLSLVKVDPQQHFTKPPA
RYTEAALVKELEKRGIGRPSTYAAIISTIQDRGYVRVESRRFYAEKMGEIVTDRLTHSFA
DLMNYDFTARMEEKLDDIAVGEKDWKRVLDDFFTDFSGELGKAEQDEVDGGMEPNKIVLT
DIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLMDDEGIINVLEEDVETAAL
RAKKRCPVCETAMDAYLIDKERKIHICGNNPSCNGYIVEKGQFQLKGYDGPVIECDKCGS
DMVLKDGRFGKYMGCTNEECKNTRKILKNGEVAPPKEDPVHFPELPCENSDAYFVLRDGA
SGLFLAASNFPRSRETRAPLVEELARFKERLPAKYQFLADAPVEDPDGRKAVVRFSRKSK
ENYVRTENDGKPSGWTALFIDGKWEITDKRKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatctctcgttatcgtggagtctcccgcgaaagcaaaaaccattaacaagtac
ctgggcaaggacttcatcgttaagtccagcgtgggtcatgtgcgcgacctgccaaccggt
gcatctaccggcggtaaaaaagctaccccagtctcgactaaaggactctctcctgaagaa
aagcagcgtatcaagcaagaaaaagaacgaaacgcgctgatcaacaagatgggtgtggat
ccttataaaggatggaaagccaaatacgaagttctgccgggtaaagagaaggtcgtttct
gaactcaaaaccctggctgaaaaagctgacaccgtctatctcgcaacggaccttgaccgc
gaaggggaagccattgcgtggcacctgcgggaaatcatcggcggtgacgacagccgttat
aagcgtgtcgtatttaacgaaattaccaaaaacgctatcaagcaagcgtttgaagcaccg
ggtgaactgaaccaggatcgcgtaaatgcacagcaggcacgccgttttctggaccgtgtt
gttggcttcatggtttcgcctcttctttggaagaaagtcgcccgtggtttgtcagctggc
cgtgtacagtctgttgctgtacgtttgctggttgagcgcgaacatgaaatcaaagcgttt
attccgcaggaatactgggatatccactctgatactgccagcgctgcaggtgaagcactc
cgactgatggtcacccaccagtcaggtactgcgtttaagccggttaatgaaacccaggcg
atggctgctgcatctttactggagaaagcagcttacacggttaaagatcgtgaagaccgc
ccgacaaccagcaagccttctgcaccatatattacgtctaccctgcaacaggcggcgagt
acccgtctgggctatggcgttaagaagacgatgatgctggcccagcgtctgtacgaagcg
ggttacatcacctatatgcgtaccgactcaaccaacctgagtaaggaagcggttgaagcg
gctcgtggctatatcgaaggtaactacggcaagaattacctgccggatgctgccattgct
tacggttcacgcggcaacgcacaggaagcgcacgaagcgattcgtccatctgatgtcaat
gtccaggctgataccctggaaggcatggagcctgacgcgcaccgcctgtatgacctgatc
tggcgccagtttgtttcctgccagatggtgcctgcgaaatatgactccagcaccctgact
gtggaagcaggcgaatttaccctgaaagctaaaggccgcaccctgcgttttgacggttgg
acacgcgtacagcgcccatccggcaaaaacgaagatgtgaccctgccaagtgtggctgtg
ggcgagcaactgtctctggttaaagtcgatcctcagcagcacttcaccaagccgcctgcg
cgttataccgaagcagcactggttaaagagcttgagaagcgtggtatcggccgtccttct
acatatgctgccattatctcgaccattcaggatcgtggttatgtgcgcgttgaaagccgc
cgcttctatgcagagaagatgggtgagattgttaccgatcgcctgacccacagttttgct
gacctgatgaactacgacttcactgcccgtatggaagagaagctcgatgatatcgccgtc
ggtgaaaaagactggaagcgtgtattggatgacttctttaccgatttctccggtgagctg
ggcaaagcggagcaggatgaagttgacggcggtatggagccgaacaagattgtcctgacc
gatatcgactgtccgacctgtggccgcaagatgggtatccgtacagcatccaccggcgta
ttcctgggctgttcaggctatgccctgcctcctaaagagcgttgtaagaccaccatcaac
ctgatggatgatgaaggtattattaacgttctcgaggaagatgttgaaaccgctgcgctg
cgtgccaagaaacgttgcccggtttgcgaaacagcgatggatgcgtacctgatcgacaag
gaacgcaagatccacatctgtggtaacaacccaagctgtaacggttacatcgtagaaaaa
ggccagttccagcttaagggttacgatggcccggttatcgaatgtgataagtgtggctct
gacatggtgctgaaagacggccgtttcggtaagtacatgggttgtaccaacgaagagtgt
aagaatacccgcaagatcctgaaaaatggcgaagttgcgccaccaaaggaagatccggtt
catttcccagaactgccttgcgagaactcagacgcttacttcgtgctgcgtgacggcgct
tccggcctgttcctggcagccagtaacttcccgcgctcacgtgagacccgtgcgccgttg
gtagaagaactggctcgcttcaaagagcgcttgcctgcgaagtaccagttccttgccgat
gcaccggttgaagacccggatggtcgtaaggcagtggtacgcttcagccgtaagagcaaa
gagaactatgtccgcaccgaaaacgatggcaagccatcgggttggacggctctcttcatt
gacggcaagtgggaaatcaccgacaagcgcaaaaaataa
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