Parasalinivibrio latis: NF212_15215
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Entry
NF212_15215 CDS
T11132
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
plas Parasalinivibrio latis
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plas03021
]
NF212_15215 (rapA)
Transcription machinery [BR:
plas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NF212_15215 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
WWE58253
LinkDB
All DBs
Position
1:3376519..3379434
Genome browser
AA seq
971 aa
AA seq
DB search
MSFALGQRWISDTESDLGLGTVVALDARTVSLMFPASEESRVYSRSDAPVTRVAFNAGDI
IESHEGWTLAVDRVEEDNGVLTYFGTREDNGETDIVLREIFLSHQIRFNRPQDKLFAGQI
DRMDRFALRYRALNNNHKQQRSPLRGLCGSRAGLIPHQLYIAHEVGRRYAPRVLLADEVG
LGKTIEAGMIIHQQILSGRTQRVLIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAYA
DSDNPFHTAQLVLCSLDFLRKSKRRLDQAVDGDWDLLVVDEAHHLEWSQDKPSREYQVVE
ALAETIPGVLLLTATPEQLGHESHFARLRLLDPDRFYDYEAFVEEERQYAPVAEAVSQLL
ANQALTNDALNSITELLSEQDVEPLLRIVTAGDVDEDQKLSARQELINNLMDRHGTGRVL
FRNTRSAIQGFPQRHLSMYPLELPNQYTTAMRVAGIMGAKLSTEQKAAQALYPEEIYQQF
EGETSSWSAFDPRVDWLIDLLKSNRNEKILVICAKAATALTLEQSLREREGIRGTVFHEG
MSILERDKAAAYFAQEEAGAQVLLCSEIGSEGRNFQFARHLVMFDLPMNPDLLEQRIGRL
DRIGQKNDIEIHVPFLLGTSQSLLARWYNEALNAFEETCPTGRSIFDKFGSDLIELIANG
DQGEALDNLIEQSAEMHAHLKADLEQGRDRLLEMHSNGGTKARELVEEIGDEDGDPELVN
FAIGLFDTIGLGQEDKGENQIILTPSDHMLVPSYPGLPADGCTVTFDRDTALSRDDVHFL
SWEHPIIQGGMDLVVSESVGTTAVSLLKNKALPVGTMFLELVYVSTVQAPKQSGITRFLP
QTPIRMLLDGKGNDLSANVAFDTFNRQLAPLGRHLASKMVSSVQNQIHALIQAGDAVAER
ELENVKAAANEEMNNTLRAELDRLQALKAVNPNIRDDELEALETQIGELTGYINNAQVQL
DSLRVVVVSHN
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgccctcggacagcgttggatcagtgatacagaaagcgatttaggattggga
actgtggtagcgcttgatgcgcgtaccgtcagcctgatgttccctgccagtgaagagagt
cgcgtttacagccgctcagatgccccggtaacccgggttgcctttaatgccggtgatatc
attgaaagtcacgagggttggacactggcggttgaccgtgtggaagaagacaacggcgta
ctgacctatttcggcacccgtgaagacaacggcgaaactgatatcgtccttcgtgagatt
ttcctcagccaccagatccgttttaaccgtccacaggacaagctgtttgccggtcaaatc
gaccgtatggaccgttttgccctgcgctaccgcgccctcaacaacaaccacaaacagcaa
cgcagcccactgcgcggcctgtgtggatcccgcgccggccttatcccacaccagctctat
attgcccatgaagtaggccgtcgctacgcgcctcgcgtgctgctcgccgatgaagttggc
ctgggtaagaccatcgaagccggtatgatcatccaccagcaaattctgtcgggccgtacc
cagcgcgtattaatcgtggtacctgagacccttcagcaccagtggctggtagaaatgatg
cgccgtttcaacctgcacttctccatttttgatgaagagcgttgtgttgaggcttatgcc
gattctgacaacccgttccataccgcccagctggtcctgtgctcgctggatttcctacgc
aagagcaagcgccgcctggatcaggctgttgatggggactgggatctgctggttgtcgat
gaagcccaccaccttgagtggagccaggacaagccaagccgtgaataccaggtagttgaa
gctctggccgaaaccatccctggcgtcctgctgttgacggcaacgccggagcaactgggc
cacgagagccacttcgcccgtctgcgccttctggacccggatcgtttctacgattacgag
gcttttgtcgaggaagagcgccagtatgcaccggttgccgaagcagtcagccagttgctg
gcaaaccaggctttaacaaacgacgcccttaacagcattactgagctgctctcagagcag
gatgttgaaccactgctgcgtattgttaccgcaggtgatgtggatgaagatcaaaaactc
tcagcccgccaggagctgatcaacaacctgatggaccgacacggtaccgggcgagttctg
ttcaggaatacccgctcagccatccagggcttcccacagcgtcacctgagcatgtacccg
ctggagctgccaaaccagtacaccactgcaatgcgtgtggccggcatcatgggtgccaag
ctttctaccgaacaaaaagcggcacaagccctgtatccggaagaaatctatcagcagttt
gaaggcgaaacatccagttggtcggcattcgacccgcgtgttgactggctgattgacctg
ctcaaatccaaccgcaacgagaagatcctggtgatttgtgccaaggcagccacagcgctg
acccttgaacagagcctgcgcgagcgcgaaggcatccgcggcacagtattccatgaaggc
atgtctatccttgaacgcgacaaggcagccgcttacttcgcccaggaagaagccggtgcc
caggttctgctgtgttctgaaatcggttcagaagggcgtaacttccagtttgcccgtcat
ctggtgatgttcgacctgccaatgaacccggatctgctggaacagcgtattggccgcctt
gaccgtatcggacaaaaaaacgatatcgaaatccacgtaccgttcctgctgggcacctcc
cagtcattgctggcacgttggtataatgaagcgctgaatgcatttgaggaaacctgcccg
accggacgctcgattttcgacaagttcggcagtgaccttatcgagttgatcgccaacggt
gaccaaggcgaagcgctcgacaacctgattgaacaaagcgcggaaatgcacgcccacctt
aaagctgacctggagcaaggccgtgaccgcctgttggaaatgcactcaaacggcggcact
aaagcccgcgaactggtagaagagattggtgacgaagacggtgacccggaactggtcaac
tttgccatcggcctgttcgataccattggccttggccaggaagacaaaggggaaaaccag
atcatcctgaccccttctgaccatatgctggtaccgagctacccaggcctgccggctgac
ggctgcaccgtgacgtttgaccgtgacaccgcgctttcccgcgatgacgttcacttcctg
agctgggagcaccctattattcagggcggcatggatttagttgtcagcgaaagtgtaggg
acgactgcagtttcccttttgaaaaacaaagcactaccggttggcaccatgttcctggag
ctggtgtacgtatctacagtccaggcacccaagcagtcaggtatcacccgcttcctgccc
cagaccccaatccgcatgctgttggatggaaaaggcaatgacctgtcagcaaacgtggcg
tttgataccttcaaccgccagttggcaccacttggccgtcacctggcaagcaagatggtc
agctctgtacaaaaccagatccacgctcttatccaggccggtgatgccgtggctgaacgt
gagctggagaacgtaaaagcagctgccaacgaagagatgaacaacaccttgcgtgcagag
ctggaccgcctgcaggcactgaaagcggtgaacccaaacatccgtgatgatgaactcgaa
gcactggaaacgcagattggagagcttaccggctatatcaataacgcccaggtgcaactg
gattccctgcgcgtagtggtggtcagccacaactga
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