Parasalinivibrio latis: NF212_15745
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Entry
NF212_15745 CDS
T11132
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
plas Parasalinivibrio latis
Pathway
plas00541
Biosynthesis of various nucleotide sugars
plas01100
Metabolic pathways
plas01250
Biosynthesis of nucleotide sugars
Module
plas_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NF212_15745 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plas01005
]
NF212_15745 (rfaD)
Enzymes [BR:
plas01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NF212_15745 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
plas01005
]
Core region
NF212_15745 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
KR
adh_short
ThiF
Phage_T7_Capsid
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WWE58343
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All DBs
Position
1:3499350..3500303
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AA seq
317 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEAGYNDILVVDNLKDGTKFVNLVDLDITDYMDKEDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDRDIPFLYASSAATY
GGRDRDFIEEREYEGALNVYGYSKQQFDNYVRRLWKDAEEHGEKLSQITGFRYFNVYGPR
EQHKGSMASVAFHLNTQILKGENPKLFEGSETFKRDFVYVGDVCKMNLWFWQNGVSGIFN
CGTGHAEPFSEVAKAVITFHGKGQAEEIPFPDHLKGRYQKFTEADLTKVRAAGYTEAFKS
VAEGVAEYMAILNKDEY
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggcggcgccggcatgatcggcagcaacatcgtcaaagcactcaac
gaagcaggctacaacgatatcctggtcgtagataacctcaaagacggcaccaaatttgtc
aacctggttgatctggatatcaccgattacatggacaaagaagatttcctgacccaaata
atggcaggtgacgactttggtcctatcgaagccattttccatgaaggcgcatgttctgcc
actaccgagtgggacggcaagtacatgatgctcaacaactatgagtactcaaaagagctg
ctgcactactgcctcgatcgtgatatcccattcctgtatgcctcatctgcagccacatac
ggtggccgggaccgtgactttatcgaagagcgcgagtatgaaggtgccctgaatgtatac
ggctattcaaagcagcagttcgataactatgtccgtcgcctctggaaagatgctgaagag
catggtgagaaactgtcccagattaccggcttccgctatttcaacgtctacggtccacgc
gagcagcataaaggcagcatggcctctgtagcattccacctgaacacccagatccttaaa
ggcgaaaacccaaaactgtttgaaggcagtgaaaccttcaagcgcgatttcgtatacgtt
ggtgacgtgtgcaaaatgaacctgtggttctggcaaaatggtgtatccggcatctttaac
tgcggtaccggtcatgcagaaccattcagcgaagtggctaaagcggttatcacattccac
ggcaaaggccaggcagaagaaattccgttcccggatcacctgaaaggtcgctaccagaag
ttcaccgaagcagatcttaccaaggtacgtgctgccggttatacagaagcattcaaatcc
gttgccgaaggcgtggcggagtatatggctattttgaataaagacgaatactaa
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