Parasalinivibrio latis: NF212_16645
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Entry
NF212_16645 CDS
T11132
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plas Parasalinivibrio latis
Pathway
plas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF212_16645 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plas03019
]
NF212_16645 (recQ)
03400 DNA repair and recombination proteins [BR:
plas03400
]
NF212_16645 (recQ)
Enzymes [BR:
plas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF212_16645 (recQ)
Messenger RNA biogenesis [BR:
plas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NF212_16645 (recQ)
DNA repair and recombination proteins [BR:
plas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NF212_16645 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WWE58501
LinkDB
All DBs
Position
1:complement(3672533..3674365)
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AA seq
610 aa
AA seq
DB search
MSCIEELTNSPAFQDGETVLREVFGYQTFREGQKGVVDAAIEGKDCLVIMPTGGGKSLCY
QIPALVRDGVAVVVSPLISLMKDQVDQLAANGVAASCLNSSMTPEALSQTLRDLHAGNIK
LLYVSPERALMREFLERLDSLNIALFAIDEAHCISQWGHDFRKEYAALGQLRERFPSVPV
MALTATADETTRADILARLSLADPYIYLGSFDRPNIRYTLVEKHKPQAQLIQFLTGLKGQ
SGIIYCNSRKRVEQVCEKLCETHFAAAAYHAGMSADERARVQEAFQRDDVQIVVATVAFG
MGINKPNVRFVVHYDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMGWLRRCLDEKPE
GPQKQVESHKLNAMAAFAEAQTCRRQVLLNYFGEYRHDACGNCDVCLDPPKRFDGTEMAQ
KAMSCVYRVNQSFGIGYVVEVLRGMQNQRIKDHGHDKLSTWGLGKDESHEYWVSIIRQLV
HRGFLMQNIARNSVLQLTEQARPILRGELSLELAVPRLGLSQRTRADKIGSRHYDKKLFA
KLRKLRKAIADEDDIPPYVVFNDATLIEMAEMLPTSQAEMLAVNGVGQVKLDRYGEAFLD
LIEDHLTMGD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtatcgaagaactgacaaattccccggcgttccaagacggtgaaaccgtgctg
agggaggtcttcggctaccagacattccgtgaaggccagaaaggtgtcgtggatgcggcg
atcgaaggcaaagactgcctggtgatcatgccgaccggcggtggcaagtcactgtgttac
cagataccggctttggtgcgcgacggcgtggccgtggtggtttcaccacttatctccctg
atgaaagaccaggtagaccagttggcggccaacggtgttgccgcctcctgcctgaactcc
tccatgacaccggaagccctcagccagacccttcgtgatctgcacgccggtaacattaag
ctgctgtacgtttcccctgaacgggcattgatgcgagagttcctggaacgcctcgactcg
ttgaacatcgccctgtttgccatcgatgaggcgcattgtatttcccagtgggggcatgat
ttccgcaaggaatatgccgctcttggccagcttcgggagcgattcccgtcagttccggtg
atggcgcttactgctaccgcagatgaaactacccgggctgatatcctagcccgtctgtca
cttgccgacccctatatttacctcggcagcttcgaccgcccgaatatccgctataccctg
gtggaaaaacacaaaccccaggcccagctcattcagttccttaccggtctgaaaggccag
agcggcattatttactgcaacagccggaaacgggtggagcaggtgtgcgagaagctgtgc
gaaacccattttgctgctgcggcttaccatgccgggatgagtgccgacgagcgcgcccgg
gtgcaggaagcctttcagcgtgacgatgtccagattgtggttgcaacggtagctttcggc
atggggattaacaaacccaacgtgcggtttgtggttcactatgacattccgcgcaatatc
gagtcctactatcaggaaaccggacgtgccgggcgggacggtctgccggctgaggcgatg
atgctttacgatcccgcagacatgggttggttgcgccgctgcctggatgaaaagccggaa
ggcccacaaaagcaggttgaaagtcacaaacttaatgccatggcagctttcgccgaagcc
cagacctgccgacggcaggtgctgctcaattacttcggcgaataccgccatgacgcctgc
ggcaactgcgatgtgtgcctcgatccgccaaagcgctttgacggtacggaaatggcgcaa
aaagccatgtcctgtgtttaccgggtgaaccagagctttggtatcggctatgtggtggaa
gtcctgcgcgggatgcaaaaccagcgcatcaaggatcacggccatgacaagctttcaacc
tggggcctcggcaaggacgagagccacgagtattgggtcagtatcatccgccagcttgtc
caccgtggtttcctgatgcagaacattgcccgcaattcagtgctccagctgactgaacag
gcccgcccgatactgcgcggcgaactgtctctggagcttgcggtgccacggctggggctc
agccagcgtacccgggcagacaagatcggcagccgccattacgacaagaagctgtttgcc
aagttgcgtaagctgcgtaaggcaatcgctgatgaggatgatatcccgccttatgtggtg
ttcaatgacgccaccttgatcgaaatggcggagatgttgccgacgtcccaggcagaaatg
ctggcggtgaacggtgtggggcaggtcaaactggatcggtatggcgaggctttcctcgac
ttgattgaagatcacctgaccatgggtgattag
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