Parasalinivibrio latis: NF212_16665
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Entry
NF212_16665 CDS
T11132
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plas Parasalinivibrio latis
Pathway
plas03420
Nucleotide excision repair
plas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF212_16665 (uvrD)
03430 Mismatch repair
NF212_16665 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plas03400
]
NF212_16665 (uvrD)
Enzymes [BR:
plas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF212_16665 (uvrD)
DNA repair and recombination proteins [BR:
plas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF212_16665 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NF212_16665 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_12
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WWE58505
LinkDB
All DBs
Position
1:complement(3676809..3678983)
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AA seq
724 aa
AA seq
DB search
MDVTDLIDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLVHRIAWLMRMEQASPFSILSV
TFTNKAAAEMRHRIEDLTRGTASGMWSGTFHGLCHRILRAHHLDANLPQDFQILDSDDQQ
RLLKRIIKAQNLDEKHWPARQASWYINAKKDEGLRAHHIDTFDPAERTWLRIYSAYQEAC
DRAGLVDFAELLLRCHELLRDKQHIREHYQARFHHILVDEFQDTNNIQYAWLRMIAGTQA
NVMIVGDDDQSIYGWRGAKVENIQRFLNEFTNAQTIRLEQNYRSTANILNAANELISNNS
ERLGKNLWTEGSEGDRISVYSAFNELDEARFVVGRVKSWLDEGGALNDVAFLYRNNAQSR
VLEEALIQAQLPYRIYGGMRFFERQEIKDSLAYLRLIANRNDDASFERVVNTPTRGIGDR
TLETVRLAARDRGTTMWEACIQLLNEQVLAGRAATALRRFVELVDALEDETREMVLFQQT
DAVIRNSGLRTMYEQEKGEKAQSRIDNLEELVTATRQFEVPEEAEGMTPLSAFLSHAALE
AGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSSEESGRLEEERRLCYV
GMTRAMQKLYICHAEMRRLYGKDMFHRPSRFIRELPETCLEEVRMRAQVSRPATAAGRFS
QETVNNNFNQTGFNLGQRVKHPKFGEGTIINFEGSGAQSRVQVAFNGEGIKWLVTQYAKL
EPMA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaacagatctcattgatggcctgaacgacaaacagcgcgaagccgttgccgcg
cctcttggcaactacctggtactggccggtgccggcagtggcaaaaccagggtgctggtt
catcgtattgcctggctgatgcgaatggagcaggcctcaccgttctctatcctttcggtg
acctttaccaacaaggcggcagcagagatgcgccaccgtattgaagacctgacccggggc
accgcatccgggatgtggagtggcaccttccacggcctttgccaccggatcctgcgtgct
caccacctggatgccaacttgccgcaggacttccagatcctcgattcagatgaccagcaa
cgcctgttgaaacgtatcatcaaggcgcagaacctggatgagaaacactggccggcgcgc
caggcgtcctggtatatcaatgccaagaaagacgaaggcttgcgtgcccaccatatcgat
acctttgaccccgcagaacgaacctggctgcgtatttacagtgcctaccaggaagcctgt
gaccgtgccgggctggtggattttgccgagttgttactgcgctgccatgaactgctgcgt
gacaaacaacatatccgtgagcattaccaggcccgtttccaccatatcctggtggacgag
ttccaggacaccaacaacatccagtacgcctggcttcggatgatagccggtacccaggcc
aacgtgatgattgtcggtgatgacgaccagtccatttacggttggcgcggtgccaaggtt
gagaatatccagcggttcctgaacgagttcaccaatgcccagactatccgcctggaacag
aactaccgctctaccgccaatatcctgaatgccgccaatgagttgatctccaacaacagt
gagcgccttggcaagaacctgtggacggaagggtccgaaggcgatcgcatttcggtctat
tccgcattcaatgagctggatgaagcccgttttgtggttggccgggtgaaatcctggctg
gatgagggcggcgcactcaacgatgtagccttcctctaccgtaacaacgcccagtcccgt
gtgctggaagaggcgcttatccaggcccagctcccgtaccggatatacggcggtatgcga
ttcttcgagcgccaggaaatcaaggactccctggcgtaccttcgcctgattgccaaccgc
aacgatgatgcatccttcgagcgtgtggtgaataccccaacccgtggtatcggcgaccgg
acattggaaaccgtgcgtctggctgcccgtgaccgtggtactaccatgtgggaagcctgt
atccagctcctgaacgagcaggtcctggctggccgtgctgccaccgccttgcgcaggttt
gtcgaactggtggatgcactggaagacgaaacacgcgagatggtgctgttccagcagacc
gatgcggtgatccgcaactccggcctgcgtaccatgtacgaacaggaaaaaggtgaaaaa
gcccagtctcgtatcgacaaccttgaggaactggtcactgcaacccgccagtttgaggtg
ccggaagaagccgaaggtatgacaccgctttcagcattcctttcccatgccgcacttgaa
gccggtgaaggccaggctgatgagtttgatgatgctgttcagctgatgaccctccacagt
gccaagggcctggagttcccgctggtgttcatggtgggggtggaagaagggatgttcccg
agccagatgtcgtcagaagagtctggccgcctggaagaggagcgccgtctctgttatgta
ggcatgacccgtgcgatgcagaaactctacatctgccatgcggaaatgcgccgcctgtac
ggtaaggacatgttccaccggccgtcccgatttatccgcgaactgccggaaacctgcctg
gaagaagtgcggatgcgcgcccaggtttcacgcccggctacagcggcagggcgtttcagc
caggaaaccgtcaacaacaactttaaccagacgggctttaaccttggccagcgggtaaaa
cacccgaaatttggtgagggtaccatcatcaattttgaaggcagtggtgcccagagccgg
gtgcaggttgctttcaacggtgagggtatcaagtggctggtgacccagtacgcgaaactg
gagccgatggcataa
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