Parasalinivibrio latis: NF212_20670
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Entry
NF212_20670 CDS
T11132
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
plas Parasalinivibrio latis
Pathway
plas00330
Arginine and proline metabolism
plas00480
Glutathione metabolism
plas01100
Metabolic pathways
plas01110
Biosynthesis of secondary metabolites
plas04148
Efferocytosis
Module
plas_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NF212_20670 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NF212_20670 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
NF212_20670 (speF)
Enzymes [BR:
plas01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
NF212_20670 (speF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
WWE61798
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Position
2:complement(810224..812404)
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AA seq
726 aa
AA seq
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MKSLIIGVSSNMPEGFSLLAELLDSEYNREAKPISCADLTDIGAVIITASDIESGLHTEI
SETGYGIPIFLLSDNEPVNPECYAWITGVIDLERQSATYYARQINEAATKYEERLLPPFF
KSMAAYVDMGNSQYDCPGHQGGQFFRKHPTGKQFYDFYGENLFRSDLCNADVALGDLLIH
EGSALRAQRHAAKVYNADKTYFVLNGTSASNKVVCNALVTEGDLVLFDRNNHKSIHQGAL
IQAGGVPVYLETARNPWGFIGGIDEHCFDETYIREQIAKVSPKHAKDKRPFRLAIIQLGT
YDGTIYNARYVMDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQS
VHKQQAGFSQTSQIHKKDSHIKGQDRYCNHKRFNNSFMMHASTSPFYALFAALDVNAKIH
DGAAGIRLWKDAVMSGIEARKEILKSCTLIRPFIPHQIDGKPWESYTTEEIATNKKFFMF
DPEQSWHKFENYGKGQYFVDPCKLLLTTAGIDENGEYADFGIPATLLANFLRENGIVPEK
SDLNSILFLLTPSEDMGKIRHLVAQINRFEKFIKEDAPLSVALPRVYQANIDRYRGYTIR
QLCQEMHDMYKELNVKKLQKEMFRRDHLPKMIHKPDVATRKYFRGECDYLPLKDALGRIA
AEGALPYPPGIICVAMGEVWTQTVVDYFLSLEEGINRFPGFAPEIQGVYLEDVDGRTTAY
CYVLKD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttaattattggtgttagttcaaatatgccagaagggttcagtcttcttgcc
gaacttttagattccgaatataaccgcgaagcgaaacctatctcctgtgcagacctaaca
gatatcggtgcggtgattattaccgcttctgatattgaatccggactccacaccgaaata
tcagaaaccggctacggtattcccattttcctgttaagcgacaatgaaccggtcaatccc
gaatgctatgcatggattaccggagtgattgaccttgaacgtcaatccgctacgtactac
gcgcgccagataaacgaagcggcgaccaagtatgaagagcgcctgctgccgcctttcttt
aaatcaatggcagcatacgttgatatgggcaactcacaatatgattgcccaggacaccag
ggcggccagtttttccgcaaacacccaacaggaaagcagttctacgatttctacggggaa
aacctgttccgtagtgacctctgtaatgctgacgttgcccttggcgatttgttgatccac
gaaggctcagctctgcgtgctcagcgtcatgcagccaaagtttataatgccgacaaaacc
tattttgtcctgaacggcacgtctgcttcaaacaaagtggtgtgtaacgcgctggtgaca
gaaggtgatttggtgctgtttgaccgtaacaaccacaagtccatccaccagggcgcttta
attcaagccggcggtgtaccggtttacctggaaacagcccgcaacccttggggctttatc
ggcggaattgatgagcactgctttgatgagacttatattcgtgaacagatcgcgaaggtc
tcaccaaagcacgctaaagacaaacgcccattccgtctggcaattatccagcttggtacc
tatgacggtactatttataacgcccgctatgtgatggacaaaatcggtcacctttgtgac
tacatcctgttcgactcagcctgggtaggctatgaacaattcatcccaatgatgaaagac
tgctcccctcttcttctcgatcttaaacccgaagatgctggggtcatcgttacccaatcg
gtccacaaacaacaggccggtttctcccaaacatcccagatccacaaaaaagacagtcac
attaaaggacaggatcgttattgcaaccacaaacgtttcaataactccttcatgatgcac
gcatcaacttcacctttctatgcactgttcgcggcactcgatgtcaacgccaaaatccat
gatggggccgccggtattcgcttatggaaagatgcggtgatgtctggcatcgaagcgcgt
aaagaaatcctcaaaagctgtaccttgattcgtccgtttatcccgcaccagatcgacggc
aaaccatgggaaagctacaccactgaagaaatcgccaccaataaaaagttcttcatgttc
gacccagagcagagctggcacaagttcgaaaattacggtaaaggccagtactttgttgac
ccttgtaagctactgctgaccaccgcaggcattgacgaaaacggtgagtacgccgacttc
ggtattccggctaccctgcttgccaacttcctgcgtgaaaacggtattgttccggaaaaa
tctgacctcaactctatcctgttccttctgaccccatcagaagatatgggcaaaatccgc
cacctggtggcacaaatcaaccgcttcgagaaattcattaaagaagatgctcctctaagc
gtcgccctgccaagggtctaccaagcgaatatcgaccgttaccgtggctataccatccgt
cagctctgtcaggaaatgcatgacatgtacaaagagttgaacgtgaaaaagctccagaaa
gagatgttccgccgtgatcacctgccgaagatgatccataaacctgacgtggcaacccgc
aaatatttccgtggtgagtgcgactacctgccgctcaaagatgcgttgggacgtattgct
gcagaaggtgcccttccttatcccccaggcattatctgtgttgccatgggtgaagtctgg
acacaaaccgttgtggattacttcctttcactggaagaaggcattaaccgcttccctggg
ttcgctcctgaaattcagggggtgtacctcgaggatgttgatggccgtaccacagcctac
tgctatgtcctgaaagactaa
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