Parasalinivibrio latis: NF212_24135
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Entry
NF212_24135 CDS
T11132
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plas Parasalinivibrio latis
Brite
KEGG Orthology (KO) [BR:
plas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plas03400
]
NF212_24135 (phrB)
Enzymes [BR:
plas01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NF212_24135 (phrB)
DNA repair and recombination proteins [BR:
plas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NF212_24135 (phrB)
Prokaryotic type
NF212_24135 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4254
Motif
Other DBs
NCBI-ProteinID:
WWE60916
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All DBs
Position
2:1596037..1597485
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AA seq
482 aa
AA seq
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MKLVWLRRDLRTRDNRAIAVAQLAGEPVVAVYAATPEQWDVHNLSSIQRDLIYRRLAALN
NELGIKNIPLGFIEAENYETAVLEVIAIAQSIGADEIIAQCEYEVNETRRDALLTKKAAA
AGIKVSLIHDRCVLPPGSVLSAKSDVYKVFTPFKRAWLKALANVNWYPVKAVSNDNLPTV
GHSAFSQTAEKLEAHISMESAGWYVDEMSILRSLREFTSGQAARYDADRDFPSKDGTSVL
SPYLAIGALSPRQCLARVLEDYPELSLDGNGGPAVWISEIIWREFYQHLSAAFPKISRGE
AFIDWADNVKWDNNKDLFEAWKSGKTGFPIVDAAMRQLADTGWMHNRLRMIVASFLTKDL
LIDWRWGEAWFSQKLVDLDYASNNGGWQWSASTGTDAQPYFRIFNPTSQGQRFDPKGDFV
REWMPELREIEGGKVHEPHKWAHKKGINLDYPLPIVDHSERRKEAISRFEQAKGKQSLAR
EA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtttggctgagaagagacctgagaacaagggataaccgggctattgctgtc
gctcagctggcaggagaacccgttgtagctgtgtatgccgctacacccgaacaatgggat
gtccacaacctgtcatctatacagcgtgacctcatctaccgtaggttagccgctctcaac
aacgaattaggtatcaaaaacattccgctggggttcattgaagcagagaactatgaaaca
gcggtgttggaggtgatagcaattgcccaatcaataggcgcagacgaaatcatcgcccaa
tgtgaatatgaagttaatgaaacccgtcgtgatgctctgcttaccaaaaaagcagctgcg
gctggaatcaaagtgtcgcttatccatgaccggtgtgttttacctcccggaagtgtttta
tctgcaaagtcagatgtttacaaagtttttaccccttttaagcgtgcgtggctgaaagca
ctggctaacgttaactggtacccggtcaaagcggtcagtaatgacaaccttccgacggtg
gggcattccgcatttagccaaaccgccgagaaacttgaagcgcacatttcgatggaaagc
gcaggctggtatgtcgatgaaatgagcatactacgaagcctgcgtgaatttacgtcagga
caggctgcaagatacgacgccgaccgggacttcccctctaaagacggaaccagtgtgctg
tcgccatatcttgcgattggtgcgctttctccacgccaatgccttgcaagagtgttggag
gactatcccgaactctctctcgacggaaatggcgggccggcagtgtggatatcagaaatc
atctggcgggagttctaccagcaccttagcgccgcattcccgaaaatcagccggggagaa
gcctttatcgactgggccgacaacgttaagtgggataacaataaagacctgtttgaagcc
tggaaatcaggcaaaaccgggttcccgattgttgatgcagcaatgcggcagttagcggac
accggatggatgcataacaggcttcgaatgatcgtcgcaagttttctcaccaaagatttg
ttaattgactggcgttggggggaagcatggttctctcaaaagcttgttgatctggattat
gcatcgaataacggtggctggcagtggtcagcgtcaacaggaacggacgcgcaaccatac
ttcagaattttcaatcctacctcacagggtcagcggtttgatcccaagggagactttgtt
cgtgagtggatgcctgagctgagggagatagagggagggaaggtacatgaaccccataag
tgggcgcataaaaaagggattaacctcgattaccccttgccgattgtcgatcactccgaa
agaagaaaagaggcgataagccgatttgagcaggccaaaggaaaacaatctttagcgcgg
gaggcatag
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