Plantactinospora sp. BB1: C6W10_02370
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Entry
C6W10_02370 CDS
T05391
Name
(GenBank) heavy metal transporter
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6W10_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plat03019
]
C6W10_02370
03009 Ribosome biogenesis [BR:
plat03009
]
C6W10_02370
Enzymes [BR:
plat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C6W10_02370
Messenger RNA biogenesis [BR:
plat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C6W10_02370
Ribosome biogenesis [BR:
plat03009
]
Prokaryotic type
rRNA helicases
C6W10_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
AVT35493
UniProt:
A0A2R4FD97
LinkDB
All DBs
Position
564949..566703
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AA seq
584 aa
AA seq
DB search
MSSDSAPPAPPVSTSPNDSDDGSGTFADLGLRTELLDALGTLGYEEPTAIQRAAIPPLLA
GQDLLGQAATGTGKTAAFALPLLHRLPEGRRSGAPVALILVPTRELAVQVSEAIHRYGRE
LGVRVLPIYGGQPIARQLRALDGGVDVVVATPGRALDHIARDTLRLDGLATVVLDEADEM
LDMGFAEDIEAILQHVPEQRQTVLFSATMPARIDGMARQYLRDPARIEIGRQPAPTGTAP
LVRQTAYVVARAHKPAALGRVLDVEAPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGG
MTQEQRDRVMGRLRAGTADLLVATDVAARGLDIEQLTHVVNYDVPSAPESYVHRIGRVGR
AGRQGVAITLAEPREHRMLKTIERTTGQRISIDKIPTVADLRTRRLEMTRAALHESLLED
DLDPFRVIVETLTDEFDVMEVALAAVKLAHESAGGGPVDEEEDIPQVAFRSDRDGRARRD
GGRDGGRDDRRAARPRSGDMACLFIGVGRRAGIRPQDLVGAITGETAVSGREIGSIEIAD
RFSLVEVPRSAANEVITRLRQSTIKGRKATVRRDREVGRDQRDG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgacagcgcaccacccgctccgccggtcagcaccagcccgaacgactccgac
gacggctccggcaccttcgccgacctcgggctgcggaccgaactcctggacgcgctcggc
acgctcggctacgaggagccgaccgccatccagcgggccgccatcccgcccctgctggcc
ggccaggacctgctcggccaggccgccaccgggaccgggaagaccgccgcgttcgcgctg
ccgctgctgcaccggctgccggaggggcggcgttccggtgcgccggtggcgctgatcctg
gtaccgacccgggaactggcggtgcaggtctccgaggcgatccaccggtacggccgcgag
ctcggcgtacgggtgctgccgatctacgggggtcagccgatcgcccggcaactgcgggca
ctggacggcggagtggacgtggtggtggccaccccgggacgggcgctggaccacatcgcc
cgggacaccctccgactcgacggactcgcgaccgtcgtgctggacgaggcggacgagatg
ctcgacatggggttcgccgaggacatcgaggcgatcctgcaacacgtaccggagcagcgg
cagacggtgctcttctccgccaccatgccggcccggatcgacgggatggcccggcagtac
ctgcgggacccggcccggatcgagatcggccggcagccggcacccaccggcaccgccccg
ctggtccggcagaccgcgtacgtggtcgcccgggcacacaagccggccgcgctcggccgg
gtactcgacgtcgaggcgccgaccgcggcgatcgtcttctgccgcagccgggaggaggtc
gaccggctcaccgagacgatgaacggtcgcggctaccgggccgaggcgctgcacggcggg
atgacccaggagcagcgggaccgggtgatgggccggctccgggccggtaccgccgacctg
ctggtggcgaccgacgtggccgcccgggggctggacatcgagcagctcacccacgtggtc
aactacgacgtgccgtcggccccggagtcctacgtgcaccggattggccgggtcggccgg
gccggccggcagggggtggcgatcaccctggccgagccgcgcgagcaccggatgctcaag
accatcgagcggaccaccgggcagcggatctcgatcgacaagattccgaccgtggccgac
ctgcggacccggcggctggagatgacccgggcggcgctgcacgagagcctgctggaggac
gacctcgacccgttccgggtgatcgtggagaccctcaccgacgagttcgacgtgatggag
gtggcgctggcggcggtcaagctggcgcacgagtcggccgggggcggcccggtcgacgag
gaggaggacatcccgcaggtggcgttccggtccgaccgggacggccgggcccgccgcgac
ggtggccgggacggcggccgggacgacaggcgcgccgcccggccccgctccggcgacatg
gcctgcctcttcatcggggtcggccggcgggccgggatccgcccgcaggatttggtcggg
gcgatcaccggcgagacggcggtcagcggccgggagatcggctcgatcgagatcgccgac
cggttctcgctggtcgaggtgccgaggtcggcggcgaacgaggtgatcacccggctccgg
cagagcaccatcaaggggcgcaaggcgacggtacgccgggatcgcgaagtcggccgcgac
cagcgcgacggctga
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