Plantactinospora sp. BB1: C6W10_04085
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Entry
C6W10_04085 CDS
T05391
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plat
Plantactinospora sp. BB1
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plat03032
]
C6W10_04085
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_04085
Enzymes [BR:
plat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C6W10_04085
DNA replication proteins [BR:
plat03032
]
Prokaryotic type
DNA Topoisomerases
C6W10_04085
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6W10_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AVT35774
UniProt:
A0A2R4FE39
LinkDB
All DBs
Position
complement(943362..944339)
Genome browser
AA seq
325 aa
AA seq
DB search
MKLRRADLGAPGYGRRRRGRGVTFLDSEGRTVTDPAQLRRLRGLAIPPAWREVWISPDPR
GHIQATGIDEAGRKQYLYHPVWRERRDREKFAHVLEVAGHLGQLRKQVDHDLRERGLTRP
RVLATIARLLDLGMFRIGGDQYTAGEAPTFGVATLRPEHARGSGGCVVLEFPAKGGVEQS
RRVTDPEVCQVLRNLRRRRRGRERLFGYWERRRWWDVRAEDVNDYLREASGTDMTAKDFR
TWHATVLAATRLCAAGPRNSEAKRRRVVAGVMREVAELLGNTPAVARASYVDPRLLDLYR
DSRLGPLEGASGQAAEQAVLALLGD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtcgcgctgacctgggcgcgcccggttacggccgccgtcgacggggacgc
ggggtgacgtttctcgactccgaggggcggaccgtcaccgacccggcgcagctgcgccgg
ctgcggggactcgccatcccgccggcctggcgcgaggtgtggatctcacccgacccccgg
ggccacatccaggcaaccgggatcgacgaggccggccgcaagcagtacctctaccacccg
gtgtggcgggagcggcgggaccgggagaagttcgcgcacgtccttgaggtggccggacac
ctcggccagctccgcaagcaggtcgaccacgatctgcgcgagcgcggcctgacccggcca
cgggtgctggccaccatcgcccgcctgctcgacctcggaatgttccggatcggcggcgac
cagtacaccgccggggaggcaccgacgttcggcgtcgccacactccggccggagcacgcc
cgggggtccggcggctgcgtcgtgctggagttcccggccaagggcggggtggagcagagc
cgacgggtgaccgatcccgaggtctgccaggtgctccgcaacctgcggcggcggcgccgg
ggccgggagcggctcttcggctactgggagcggcggcgctggtgggacgtacgcgccgag
gacgtcaacgactacctccgcgaggccagcggtaccgacatgacggcgaaggacttccgt
acctggcacgccaccgtactcgcggccacccggctctgcgcggccggaccgcgcaactcc
gaggcgaagcgacgacgggtggtggccggggtgatgcgggaggtggccgagctgctcggc
aacaccccggcggtggcccgggcgtcgtacgtcgacccccggctgctcgatctctatcgg
gacagtcggctcgggcccctcgaaggggcgtccggccaggcggccgagcaggcggtgctc
gccctgctcggcgactga
DBGET
integrated database retrieval system
