Plantactinospora sp. BB1: C6W10_10375
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Entry
C6W10_10375 CDS
T05391
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03420
Nucleotide excision repair
plat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6W10_10375
03430 Mismatch repair
C6W10_10375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_10375
Enzymes [BR:
plat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C6W10_10375
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6W10_10375
MMR (mismatch excision repair)
Other MMR factors
C6W10_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AVT41346
UniProt:
A0A2R4FV58
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All DBs
Position
2409921..2413412
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AA seq
1163 aa
AA seq
DB search
MTQPSLFSPAPTQRVADAGPRYTPVELAKLLRLPAPTLEQAAIISAPVEPLLVVAGAGSG
KTETMAARVVWLVANGYVEPGHVLGLTFTRKAAGELGTRIRTRLGQLVRRLGRNSRNSDD
DPFGGEPTVATYHSYAARIVTEHGLRGGYEPSTRLLTEASRWQIVDSIVRNHDGDMSEVE
RQPSTVTDAVLALAADLAEHLVTPDELAAWTGRFFAEVQSRPGRVYADVRKALHVQQLRL
RLLPLVRAYAQRKDDFEAMDFGDQLARAARVARDHPEVGAIERGRYKVVLLDEYQDTSHA
QVVLLRSLYGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTEFAQPDGTPAQVRTLTTSW
RNRPQILDVANGLAAPLRAAGAQVAELAAAFRVDEEIPGRTGRGYAGGTVHCALLDTYAD
EADWIADSILAAWRGAARMPDALPEQIPVVARPTTAVLVRLRSQIPAIEAALRDRGLPVE
VVGLGGLLDTPEVRDVVCTLRVLSDPTDGAALLRLLTGARWRIGPRDLVALHRRATAIAR
ARRELPRSDGDDDEPEIVTDRLDEATLVEALADLGPAQAYSAEGYARLRAYAKELGLLRH
RLDQPLPDLLADVERTIGLDVEVAVRAGSDGRGGDAGLARGHLDALGDVAARFAGDSAGA
PLHAFLAFLAAAEDEERGLSPGEVEVVEGAVQILTAHAAKGLEWDVVSVAGLSRGVWPGT
ARGSDHYLLGLGVLPFPLRGDADGLPELALHDADDQKAVARALATFTDDWRAHDEREERR
LAYVAVTRPRRLLLCSGYWWGEGTKRPRGPSTFLSEVYEWCLTTPEAGESGFVVDAWAPE
PAADASNPTTEVVLRAEWPADPLGARRPVLAEAAALVRRLMSEEPPEAEPTQATGDPARA
DGTDQADGAGGEDPADGAGGGELPPVDPEAAAVAAAWRREAELLLAERDMLADRSGPVEV
ALPGHLSVSQLVTLRRDPAALARVLRRPMPRRPEPYARRGTAFHSWLEQRYGISRLLDVD
ELPGAADSDAAPDEALAELQERFLASEWAERTPVEVEVPFATSIGGLLVRGRMDAVFTLP
GGRYDVVDWKTGRQPTGVEAEAAAVQLAAYRLAWAELAGVPVDRVRAAFHYVRENVTVRP
ADLLDADGLAALVAQVPEAAAGG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccctcgctgttcagcccggcgccgacccagcgggtcgccgacgccgggccg
cgctacaccccggtcgagctggccaagctgctccggctgccggcaccgacgctggagcag
gccgcgatcatctcggcgccggtcgagccgctgctggtggtcgccggggccggttccggc
aagaccgagacgatggccgcccgggtggtctggctggtcgccaacgggtacgtcgaaccg
gggcacgtcctcggcctcaccttcacccggaaggcggccggggaactcggcacccggatc
cggacccggctcggtcaactcgtccgtcggctcggccggaacagccgcaacagcgacgac
gacccgttcggcggcgagccgacggtggcgacgtaccactcgtacgcggcccggatcgtc
accgagcacggcctgcgtggcgggtacgagccgtcgacccggctgctcaccgaggcgtcc
cgctggcagatcgtcgactcgatcgtccgcaaccacgacggcgacatgtccgaggtggag
cggcagccgagcactgtcaccgacgccgtactggcgctcgccgcagacctggccgagcac
ctggtcaccccggacgagttggccgcctggacgggacggttcttcgccgaggtgcagtcc
cggcccggccgggtctacgccgacgtacgcaaggcgctgcacgtccagcagctccggctc
cggctgctgccgctggtccgggcgtacgcccagcgcaaggacgacttcgaggcgatggac
ttcggcgaccagctcgcccgggcggcgcgggtggcccgggaccacccggaggtcggcgcg
atcgagcgcgggcgctacaaggtggtgctgctcgacgagtaccaggacaccagtcacgcc
caggtggtgctgctccgttcgctctacggcggcgggcacccggtcaccgccgtcggcgac
ccgtgccagtcgatctacggctggcggggtgccagcgccggcaccctggaccggttcccg
accgagttcgcccagccggacggtacgccggcccaggtgcgcaccctcaccacgagctgg
cggaaccggccgcagatcctggacgtcgccaacgggctcgccgcgccgctgcgggccgcc
ggagcccaggtcgccgagctggccgccgcgttccgggtcgacgaggagatccccggccgc
accggccgggggtacgccggcggcacggtgcactgcgcgctgctcgacacgtacgccgac
gaggccgactggatcgccgacagcatcctcgccgcctggcggggcgcggcccggatgccg
gacgcgctgccggagcagattccggtggtggcccggccgacgacggcggtgctggtccgg
ctgcgcagccagatcccggcgatcgaggcggcgctgcgggaccggggactgccggtcgag
gtggtcggcctcggcggactgctggacacccccgaggtgcgggacgtggtctgcaccctg
cgggtgctctccgacccgaccgacggtgccgcgctgctccggctgctgaccggagcccgc
tggcggatcggcccgcgtgacctggtcgccctgcaccgccgggccaccgcgatcgcccgg
gcccgccgggaactgccccgctccgacggcgacgacgacgagccggagatcgtcaccgac
cgcctcgacgaggcgaccctggtcgaggcgctggccgacctcgggccggcgcaggcgtac
tcggcggagggttacgcccggctgcgggcgtacgccaaggaactcggcctgctccggcac
cgcctggaccagccgctgccggacctgctcgcggacgtcgaacggaccatcggcctcgac
gtcgaggtggcggtccgcgccggcagcgacggccggggcggcgacgccggcctggcccgg
gggcacctcgacgcgctcggcgacgtggcggcccggttcgccggtgactcggccggtgcg
ccgctgcacgcctttctggccttcctcgccgccgccgaggacgaggagcggggactctcc
ccgggcgaggtcgaggtggtggagggtgcggtgcagatcctcaccgcgcacgccgccaag
ggcctggagtgggacgtggtctcggtggcggggctgagccggggcgtctggccgggtacg
gcccggggctccgaccactatctgctcggcctcggggtgctgccgtttccgctgcgcggc
gacgcggacgggctgcccgagctggcgctgcacgacgccgacgaccagaaggcggtggcc
cgggcactggccaccttcaccgacgactggcgggcgcacgacgagcgggaggaacgccgg
ctggcgtacgtcgcggtcacccggccgcgccggctgctgctctgctccggctactggtgg
ggcgaggggacgaaacgcccacgcggcccgtcgaccttcctctccgaggtgtacgagtgg
tgcctgaccacgcccgaggccggcgagagcggcttcgtggtcgacgcctgggcgccggag
ccggcggccgacgccagcaacccgaccaccgaggtggtactccgggccgagtggccggcc
gacccgctcggtgcccgtcggccggtactcgccgaggccgccgccctggtccgccgcctg
atgtcggaagaaccacccgaggcggagccgacccaggcgaccggcgaccccgcccgggcg
gacggcaccgaccaggcggacggcgccggtggtgaggacccggcggacggcgccggtggt
ggggagttgccgccggtcgacccggaggcggcggccgtcgcggcggcctggcggcgcgag
gccgaactgctgctcgccgagcgggacatgctggcggaccgctccggaccggtcgaggtg
gcgctccccggccacctgtcggtctcgcagctcgtgacgctgcgccgggacccggcggcg
ctggcccgcgtgttgcgccggccgatgccccggcgccccgagccgtacgcccggcgcggc
accgcgttccactcctggctggagcagcggtacgggatcagccggctgctcgacgtcgac
gagctgcccggggcggccgactcggacgccgccccggacgaggcgctggccgagttgcag
gagcgcttcctggccagcgagtgggccgagcgcactccggtggaggtggaggtgccgttc
gccacgtcgatcggcgggctgctggtccggggccggatggacgccgtcttcaccctcccc
ggcggccgctacgacgtcgtcgactggaagacggggcgacagccgaccggggtcgaggcg
gaggccgccgcggtgcagttggcggcgtaccggctggcctgggcggaactggcgggtgtg
ccggtcgaccgggtccgggcggccttccactacgtacgggagaacgtgaccgtacgtccg
gcggacctgctcgacgccgacggcctggccgcgctggtggcgcaggtgccggaggcggcg
gcgggcggctga
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