Plantactinospora sp. BB1: C6W10_13805
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Entry
C6W10_13805 CDS
T05391
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6W10_13805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_13805
Enzymes [BR:
plat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C6W10_13805
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C6W10_13805
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C6W10_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5830
NFACT_N
TackOD1
DZR
Motif
Other DBs
NCBI-ProteinID:
AVT37359
UniProt:
A0A2R4FIP8
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All DBs
Position
3172941..3173804
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AA seq
287 aa
AA seq
DB search
MPELPEVETVREGLSRWVTGRRIAAVEVRHPRAVRRHLPGAAHFAAVLVGRTILAARRRG
KYLWLPLDSGDAVVGHLGMSGQLLVRPTEAADEIHLRIRFTFDDGGTDLRFVDQRTFGGL
AVSEGGATLPAEIAHIARDPMDPEFSDTDFVAALRRRRTEVKRALLDQTLISGVGNIYAD
EALWRAGLHGARPTETLTGPAVTRLLGHVRDVLGEAIKEGGTSFDALYVNVNGESGYFDR
ELNVYGREGLPCRRCGTPIRREAFMNRSSFSCPRCQTRPRAAARPTR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtggagacggtccgggagggactgtcccgctgggtcaccggt
cgacggatcgcggccgtcgaggtacgccatccgcgcgccgtacgccggcatctgcccggc
gccgcgcacttcgccgcggtactcgtcggacggacgatcctggcggcccggcggcgtggc
aaatacctgtggctgccgctggacagcggtgacgcggtcgtgggacacctcgggatgtcc
ggccagctcctggtccggcccaccgaggcggccgacgagatccacctgcggatccggttc
accttcgacgacggcggcaccgacctgcgcttcgtcgaccagcgcaccttcggcgggctc
gcggtctcggagggcggggccaccctgccggccgagatcgcgcacatcgcccgggacccg
atggatccggagttctccgacaccgacttcgtggccgcgttgcggcgacggcggaccgag
gtaaaacgggcgctgctcgaccagaccctgatctcgggggtcggcaacatctacgccgac
gaggcgctgtggcgggccggcctgcacggcgcccgccccacggagacgctcaccgggccg
gcggtcacccggctgctcggccacgtccgggacgtgctcggcgaggcgatcaaagagggc
ggcaccagcttcgacgcgctctacgtcaacgtcaacggcgagagtggctacttcgaccgc
gaactgaacgtgtacggccgggaggggctgccctgccgccgctgcggcacgccgatccgc
cgcgaggcgttcatgaaccggtcgtccttcagttgcccccgctgccagacccggccccgg
gcggcagcgcggccgacccgctga
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