Plantactinospora sp. BB1: C6W10_16860
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Entry
C6W10_16860 CDS
T05391
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat00040
Pentose and glucuronate interconversions
plat01100
Metabolic pathways
plat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C6W10_16860
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6W10_16860
Enzymes [BR:
plat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
C6W10_16860
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
ANAPC10
Motif
Other DBs
NCBI-ProteinID:
AVT37849
UniProt:
A0A2R4FK84
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Position
complement(3846747..3848318)
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AA seq
523 aa
AA seq
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MRRRPTALRLQAALATAAVAVAVGVALPMPQASAAVGSATGYATQNGGTTGGAGGQTVRA
STGTAIHTALCNRASSSTPITIEVSGTINHGNTSKVSGDSCNTAADKIELKEISNVTIIG
VGGAVFDQLGIHIRDSSNIIIQNVTIRNVKKSGSPTSNGGDAIGMESTVRNVWVDHVTLE
ASGGESEGFDGLFDMKDNTQYVTLSYSILRNSGRGGLVGSSESDRSNGFITYHHNLYENI
DSRTPLLRGGIAHIYNNHYVSLHESGINSRAGARAKVENNYFRNSKDVLGTFYTSEAGYW
QVSGNVFDNVTWSSPGSDTNPAGPNPQSNTTVSIPYSYRLDGAGCVPDVVRQTAGANTGL
RVSDGSCSPQGPTPTPTRPTPTPTRPTPTPTTPTPTPTQPPSGTNLSIGAGSDGSSKADG
TGYGNVRDGDMNTYWSPAGSTGSISIKWGSATTVSRINIREASGAVGNIGSWRVVNHDTG
AVLTSGSGAGVITFPATSLRKITFDITSSTSTPRVAEFETYAG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagacgacgaccaaccgcattgcggcttcaggcggcgctggcaacggcggccgtcgcg
gtcgcggtcggtgtcgcgctaccgatgccccaggcgtcggccgcggtcggcagcgccacc
ggctatgcgacgcagaacggtggaaccaccggcggtgcgggcggacagacggtccgggcc
agcaccgggaccgctatccacacggccctctgcaaccgggccagtagcagtaccccgatc
accatcgaggtctccgggaccatcaaccacggcaacaccagcaaggtctccggcgacagc
tgcaacaccgccgccgacaagatcgagctcaaggagatcagcaacgtcacgatcatcggg
gtcggcggagccgtcttcgaccagctcggcatccacatccgcgactccagcaacatcatc
atccagaacgtgaccatccggaacgtcaagaagtcgggatcgccgacctccaacggcggc
gacgcgatcgggatggagagcaccgtccgcaacgtctgggtcgatcacgtcactctggag
gcctcgggcggggagtcggagggcttcgacggcctcttcgacatgaaggacaacacccag
tacgtcaccctgtcgtacagcatcctgcgcaactccggccgtggtggcctggtcggatcc
agtgagagcgaccgctcgaacggcttcatcacgtaccaccacaacctgtacgagaacatc
gactcccgtacgccgctgctccgtggcggcatcgcgcacatctacaacaaccactacgtg
agcctgcacgagtccggcatcaactcccgggccggagcccgggccaaggtggagaacaac
tacttcaggaactcgaaggacgtgctgggcaccttctacaccagcgaggccggttactgg
caggtcagcggcaacgtcttcgacaacgtgacctggtccagcccgggcagcgacaccaac
ccggccggccccaacccgcagtccaacaccaccgtcagcatcccgtactcctaccgcctc
gacggggccggctgcgtgccggacgtcgtccggcagacggcgggcgcgaacacgggcctg
cgggtctcggacggcagctgctcgccgcagggaccgacgccgaccccgacccgccccacg
ccgacgccgacgcggcccacacccacgccgacgacccccacgccgaccccgacccagccg
cccagcgggaccaacctcagcatcggggccggctcggacggctccagcaaggccgacggc
acgggctacggcaacgtgcgggacggtgacatgaacacctactggtcgccggccggctcg
accgggtccatctcgatcaagtggggttccgccaccaccgtctccaggatcaacatccgc
gaggcgtcgggcgccgtcggcaacatcgggtcctggcgggtggtcaaccacgacaccggt
gcggtcctgacctccggcagcggagcgggggtcatcaccttccccgcgacctcactacgc
aagatcacttttgacatcaccagttcgaccagcacgccgagagtcgccgaattcgagacc
tacgccgggtag
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