Plantactinospora sp. BB1: C6W10_17175
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Entry
C6W10_17175 CDS
T05391
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
plat
Plantactinospora sp. BB1
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plat03021
]
C6W10_17175
Transcription machinery [BR:
plat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6W10_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
DUF4440
SnoaL_3
SnoaL
SnoaL_4
NTF2
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AVT37892
UniProt:
A0A2R4FK50
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All DBs
Position
3928239..3929285
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AA seq
348 aa
AA seq
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MGTGHDDLLVAAARDGDESAFRTLVERHRRELRVHCYRMLGSYHDAEDLVQETFLRAWKN
IAGFQGRATIRAWLYRIATNACLDALDGRTRRMLPHHLSGPSNPDDDLAPPTDIHWLQPF
PDRLWEPAAPSETEPDAVAVTRETIELAFLAAIQHLPPRQRAVLILRDVLGWPASQTATL
LDNTVASVNSALQRARATIREHLPERRLDWAPTAAPSEEERTVLRRYVDALERADLATVA
ELLAEDVRTTMPPYPTWFRGRESVLRALATSWDPALPGYVGRFRTLPTRANGRPAVATYV
RRPGEPDHRPFAISVFWFGGGRITEIVAFHDPGLFPAFALPPSLPGHR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtggggaccgggcacgacgacctgctcgtcgcggcggcgcgggacggcgacgagtccgcg
ttcaggaccctggtggagcggcaccggcgggagctgcgggtgcactgctaccggatgctc
ggttcctaccacgacgccgaagacctggtgcaggagacgttcctgcgcgcgtggaagaac
atcgccggcttccagggccgcgccacgatccgggcctggctctaccggatcgccaccaac
gcctgcctggacgccctcgacggccggacccgtcggatgctcccgcaccacctgagcggc
ccgtcgaacccggacgacgacctggcgccgcccaccgacatccactggctccagccgttc
ccggaccggctgtgggagccggccgcgccgagcgagaccgaaccggacgccgtggcggtc
acccgggagacgatcgagctggcgttcctggccgcgatccagcacctgccgccgcgacag
cgggccgtactgatcctgcgggacgtgctcggctggccggccagccagaccgcgaccctg
ctcgacaacaccgtggcgtcggtgaacagcgccctgcaacgggccagggccacgatccgg
gagcacctgccggagcgccgcctcgactgggcgcccacggcggcacccagcgaggaggag
cggacggtgctgcggcgctacgtcgacgcgctggagcgcgccgacctggccacggtggcc
gagctgctggccgaggacgtccggacgacgatgccgccgtacccgacctggttccggggg
cgggagtcggtgctgcgagcgctggcgacgagctgggatccggcgctgccggggtacgtc
ggccggttccggaccctgccgacccgggcgaacgggcgccccgcggtggccacgtacgtc
cggcggcccggagaacccgaccaccggccgttcgcgatctccgtgttctggttcgggggc
ggtcggatcaccgagatcgtcgcgttccacgaccccgggctgtttccggcgttcgcgctg
cctccgtcgctgcccggccaccgatga
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