Plantactinospora sp. BB1: C6W10_17295
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Entry
C6W10_17295 CDS
T05391
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat00040
Pentose and glucuronate interconversions
plat01100
Metabolic pathways
plat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C6W10_17295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6W10_17295
Enzymes [BR:
plat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
C6W10_17295
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
nec1
Motif
Other DBs
NCBI-ProteinID:
AVT37911
UniProt:
A0A2R4FK62
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Position
3959585..3960682
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AA seq
365 aa
AA seq
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MGVRASARPKARLGRSLVGGVVTLLAAAAVVSAAPASAAAVSAEGLVGFATLSGYGRTGT
NGGTGGPTVTVGNYAQLAAAVADDLPRIVRVSGTITGNGDDMLDVGSNKTIIGVGSSATI
SGFGLDVNGWGPAEVDWGGDTCDPAERDRFTHVQNVIIRNLSFRNSPDDSINVQCYSHHV
WIDHNTFYPASDGSVDIKRGSDLATVSYNRFAGTDKSMLLGHSDNNAAQDTGYLRVTYHH
NWFDGSNTRHPRVRFGYAHVYANYVSVDDYFIGLGVEGRIYAESNYVRGAKTITQDFGNA
RLTWTNSNFYDIATITRANDSGKTKDDWLRADGSVGPPPYGYSAGSASSSPPSAGAGVSG
ADIVP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccgtgcttcagcccgcccgaaagcccggctcggccggtcactggtcggcggc
gtggtcacgctgctggccgccgccgcggtcgtctccgcggctcctgccagcgccgccgca
gtctccgccgagggcctggtcggcttcgccaccctctccgggtacggccggaccggcacc
aacggcgggaccggcggcccgacggtgacggtcggcaactacgcccagttggcggcggcg
gtcgccgacgacctgccgaggatcgtccgggtctccggcaccatcaccggcaacggcgac
gacatgctggacgtcggctccaacaagaccatcatcggcgtcgggtcgtcggcgacgatc
agcggcttcgggctggacgtcaacggctgggggccggcggaggtggactggggcggcgac
acctgcgaccccgccgagcgggaccgcttcacccacgtgcagaacgtcatcatccgcaac
ctgtcgttccggaactcgccggacgactcgatcaacgtgcagtgctactcgcaccacgtc
tggatcgaccacaacaccttctacccggcctccgacggctcggtggacatcaagcgcggc
tcggatctggcgacggtctcctacaaccggttcgccggcaccgacaagtcgatgctgctc
gggcacagcgacaacaacgccgcccaggacaccggctacctgcgcgtgacgtaccaccac
aactggttcgacgggtcgaacacccgccacccccgggtgcggttcggctacgcccacgtc
tacgccaactacgtcagcgtcgacgactacttcatcgggctcggggtcgagggccggatc
tacgccgagagcaactacgtccggggtgccaagaccatcacccaggacttcggcaacgcc
cggctgacctggaccaacagcaacttctacgacatcgccaccatcacccgggcgaacgac
agcggcaagaccaaggacgactggctgcgggccgacggcagcgtcgggccaccgccgtac
ggctactcggccgggtcggccagcagcagcccgccgtccgcgggtgccggggtcagcggc
gcggacatcgtcccgtag
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