Plantactinospora sp. BB1: C6W10_18105
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Entry
C6W10_18105 CDS
T05391
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
plat
Plantactinospora sp. BB1
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plat03032
]
C6W10_18105
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_18105
Enzymes [BR:
plat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C6W10_18105
DNA replication proteins [BR:
plat03032
]
Prokaryotic type
DNA Topoisomerases
C6W10_18105
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6W10_18105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AVT38037
LinkDB
All DBs
Position
4142955..4145012
Genome browser
AA seq
685 aa
AA seq
DB search
MTAQPEILYGADDLTHLEGLDAVRKRPGMYIGSTDSRGVGHLFNEIVDNSTDEGVAGHAT
RVEVTLHADGSVQVDDDGRGIPTDVHAKSGLSGVELVLTRLHAGGKFGNSGYKTSGGLHG
VGASAVNALSRRFDVTVRRDGKIHQMSFQHGVPGIFDGAGAGATFAAHPGLRLLGKMKRG
ERTGTSIRYWHDARYFESGATLDVEAVRTKLRHTAFLVPGVTYVLRDATGGAISAETFHF
PNGLADMVDYLAPAAEKPVSGTLLVTGEGTYRENAADANGVMRSNVERRAEVEVAFRWGT
GYERTVECFTNTIRNVHGGTHRRGFERGATRALVDAIRNARGLLKPKEDAPVLDDILEGL
TAVVHVRIPEPQFTSQTKDELSTAPVTKVVQAVVEQHIKAWLEDRRTRAEARTVLQKIVD
AARVRLTQKQQKDAARRKTALEGAAMPPKLVDCRSTGVERSELFIVEGDSALGTARLARS
SEYQALLPIRGKILNVQKASLQQVLDNAECSAIIQVLGAGSGRTFDLGSLRYGRILIMAD
ADVDGSHIRTLLITLFAKYMRPVIEAGRLYAAVPPLHKISTRGKNPETFYTYTQAEMEAT
VGRLEKAKKQVVTPIPRFKGLGEMDADELWDTTMNPASRMVRRITMDDAEAAEQVLELLM
GEKVEPRKNWLIDSANRVDQEAIDA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcacagcctgaaatcctgtacggggccgacgacctcacccacctggagggtctg
gacgcggtccggaagcgccccggcatgtacatcgggtcgaccgacagccgtggcgtgggt
cacctgttcaacgagatcgtggacaactccaccgacgagggggtcgccggccacgcgacc
cgggtcgaggtcaccctgcacgccgacggctcggtgcaggtcgacgacgacggccggggg
atcccgacggacgtgcacgccaagtccgggctctccggggtcgagctggtgctgacccgg
ctgcacgcgggtggcaagttcggcaactccggctacaagacctccggcggcctgcacggg
gtgggcgcctcggcggtcaacgcgctctcccggcggttcgacgtgacggtgcgccgggac
ggcaagatccaccagatgtcgttccagcacggcgtaccgggaatattcgacggggccggc
gccggggcgaccttcgccgcgcaccccgggctgcgcctgctcggcaagatgaagcggggc
gagcggaccggcacctcgatccgctactggcacgacgcgcgttacttcgagagcggcgcg
accctcgacgtcgaggcggtccggaccaagctgcggcacaccgcgttcctggtgccgggc
gtgacctacgtgctgcgggacgccaccggcggggcgatcagcgccgagacgttccacttc
ccgaacggcctggccgacatggtcgactacctggcgccggccgccgagaagccggtctcc
ggcacgctgctggtcaccggcgagggcacctaccgggagaacgccgccgacgccaacggc
gtgatgcgcagcaacgtcgagcgccgcgccgaggtcgaggtggcgttccgctggggcacc
ggctacgagcggaccgtcgagtgcttcaccaacaccatccgcaacgtgcacggcggcacc
caccgccggggcttcgagcggggtgccacccgggccctggtcgacgcgatccgcaacgcc
cgcggcctgctcaagccgaaggaggacgccccggtcctggacgacatcctcgagggcctc
accgccgtcgtgcacgtccggatcccggagccgcagttcacctcgcagaccaaggacgag
ctttccaccgccccggtgaccaaggtggtgcaggccgtcgtcgagcagcacatcaaggcc
tggctggaggaccgcaggacccgggccgaggcgcgtacggtgctgcagaagatcgtcgac
gcggcccgggtccggctgacccagaagcagcagaaggacgccgcccggcgcaagaccgcg
ctggagggcgcggcgatgccgccgaagctggtcgactgccgctccaccggggtcgagcgg
agcgagctgttcatcgtcgagggagacagcgcgctcggcaccgcccggctggcccgctcc
agcgaataccaggcgctgctgccgatccggggcaagatcctcaacgtgcagaaggccagc
ctccagcaggtgctggacaacgccgagtgctcggcgatcatccaggtgctcggggcgggt
tccgggcgcaccttcgatctcggctcgctgcgctacggccgcatcctgatcatggcggac
gcggacgtcgacggctcgcacatccgtaccctgctgatcacgctcttcgcgaagtacatg
cggccggtgatcgaggcgggccggctctacgccgccgtgccgccgctgcacaagatcagc
accagggggaagaacccggagaccttctacacctacacccaggccgagatggaggccacg
gtcggccggctggaaaaggcgaagaagcaggtggtgaccccgattccccggttcaagggt
ctcggtgagatggacgccgacgagctgtgggacaccacgatgaacccggccagccggatg
gtccgacggatcaccatggacgacgccgaggcggccgagcaggtcctcgaactgctgatg
ggcgagaaggtcgagccccggaagaactggctgatcgactcggcgaaccgggtcgaccag
gaggcgatcgacgcctga
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