Plantactinospora sp. BB1: C6W10_19085
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Entry
C6W10_19085 CDS
T05391
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
plat
Plantactinospora sp. BB1
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plat03021
]
C6W10_19085
Transcription machinery [BR:
plat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6W10_19085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
STAS
Sigma70_r3
STAS_2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_28
IF2_N
HTH_Tnp_4
MarR_2
DUF7343
MarR
HTH_24
HTH_Crp_2
HTH_3
SpoIIAA-like
Motif
Other DBs
NCBI-ProteinID:
AVT38198
UniProt:
A0A2R4FL16
LinkDB
All DBs
Position
complement(4354107..4355243)
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AA seq
378 aa
AA seq
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MFGQITTTPPAERGLEDLDAAALAYAARIAGLPPERRQEARDDLVRFALPFAGRLARRYR
GRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPRRL
RDLILEVGQATAALTSELSRAPSVAELAARLETPEEEILAALESAAGYSPASLNAPVGGE
SSAEFGDLVGESDTDLESVDDRVTVSGLLGRLPWRERRILAMRFYGNQTQAEIAARFGIS
QMHVSRLLSRALTWLRQAMLADSPAPWQAGGAEAGGAPARLEVRQAGERVVVEVTGEIDR
ETAEQLRQAVVEAVADGHPTEVAIDLTDVAKLDGPALAALVAGRDAAHRAGVRWRLARAQ
PVVQHSLSAAGLVALPAD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagatcaccaccacaccaccggccgagcggggactggaggacctggacgcg
gccgctctggcgtacgcggcgcggatcgccggcctgccgccggaacgccggcaggaggcc
cgggacgacctcgtccggttcgccctgccgttcgccggcaggttggcccggcgctaccgg
ggccggggtgaaccactggaggacctggaacaggtggcccggttgggcctggtgaacgcg
gtcgaccggtacgacccggaacggggctcgttcaccgcgtacgccgcgatcaccatcgtc
ggcgagatcaaacggcacttccgggaccggacctggggtgtgcacgtaccccggcggctg
cgcgacctgatcctggaggtcggccaggcgacggcggcgctgaccagcgagctgtcccgg
gcgccgagcgtggccgagttggccgcccggctggagacgccggaggaggagatcctcgcg
gcgctggagtcggcggccggctacagtccggcctcgctgaacgccccggtcggcggggag
agttcggcggagttcggcgacctcgtcggcgagtccgacaccgacctcgagtcggtcgac
gaccgggtgacggtcagcgggctgctcggccggctgccctggcgggagcggcggatcctg
gcgatgcgcttctacggcaaccagacccaggccgagatcgccgcccggttcggcatctcg
cagatgcacgtctcccggctgctctcccgggcgctcacctggctgcggcaggcgatgctc
gccgactcgccggccccgtggcaggccggcggggccgaggcgggtggcgcgccggcccgg
ctcgaggtgcgccaggcgggggagcgggtggtggtcgaggtgaccggggagatcgaccgg
gagaccgcggagcagttgcgccaggcggtggtcgaggcggtcgccgacgggcatccgacg
gaagtggcgatcgacctgaccgacgtggcgaagctggacgggccggcgctggccgccctg
gtcgccggccgggacgccgcacaccgggccggggtccggtggcggctggctcgggcgcaa
ccggtggtgcagcattcgctcagcgccgccggcctggtcgcgttgccggcggactga
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