Plantactinospora sp. BB1: C6W10_24525
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Entry
C6W10_24525 CDS
T05391
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6W10_24525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plat03021
]
C6W10_24525
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_24525
Enzymes [BR:
plat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6W10_24525
Transcription machinery [BR:
plat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6W10_24525
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6W10_24525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AVT39074
UniProt:
A0A2R4FNI9
LinkDB
All DBs
Position
complement(5637149..5638171)
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AA seq
340 aa
AA seq
DB search
MLITQRPTLTEESISETRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIKVDGVL
HEFTTIPGVKEDVVELVMNVKELCVSSDHDEPVSMYLRKQGPGDVTAGDIQPPAGVSVHN
ADLKLATLNGKGRLDMELTVERGRGYVTAAQNKQAGAEIGRIPVDSIYSPVLKVTYRVEA
TRVEQRTDFDRLIIDVETKASIGPRTALASAGSTLVELFGLARELDESAEGIDIGPSPQD
AQLAADLALPIEELDLTVRSYNCLKREGINTVGELIGRTEADLLDIRNFGQKSIDEVKMK
LAGMGLGLKDSAPNFDPAHVVDSFGEADYDTDDYRETEQL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacccagcggccgaccctcaccgaggagtcgatcagcgagacccggtcccgg
ttcaccatcgagccgctcgagccgggtttcgggtacaccctgggcaactcgctccggcgg
accctgctctcctccatcccgggcgcggcggtcacctcgatcaaggtcgacggtgtgctg
cacgagttcaccaccatcccgggcgtcaaggaggacgtggtcgagctcgtcatgaacgtc
aaggagctctgcgtcagctccgaccacgacgagccggtcagcatgtacctgcgcaagcag
ggccccggcgacgtcaccgccggtgacatccagcccccggccggtgtctccgtgcacaac
gccgacctcaagctcgccaccctgaacggcaagggccggctcgacatggagctgaccgtc
gagcggggtcgcggctacgtcaccgccgcgcagaacaagcaggccggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctgaaggtgacgtaccgcgtcgaggcg
acccgggtcgagcagcgtaccgacttcgaccggctgatcatcgacgtcgagaccaaggcg
tcgatcgggccgcgtaccgcgctcgcctccgccggctccaccctggtcgagctcttcggg
ctggcccgggagctggacgagagcgccgagggcatcgacatcggcccgtcgccgcaggac
gcgcagctcgccgccgacctggcgctgccgatcgaggagctggacctcaccgtccggtcc
tacaactgcctcaagcgcgagggcatcaacacggttggcgagctcatcgggcgtaccgag
gccgatctgctcgacatccggaacttcgggcagaagtcgatcgacgaggtcaagatgaag
ctcgccggcatggggctggggctgaaggactcggcgcccaacttcgacccggcgcacgtc
gtcgactccttcggcgaggccgactacgacaccgacgactaccgcgagaccgagcagctt
tag
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