| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
plat Plantactinospora sp. BB1
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:plat00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C6W10_24710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:plat03021]
C6W10_24710
03400 DNA repair and recombination proteins [BR:plat03400]
C6W10_24710
Enzymes [BR:plat01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C6W10_24710
Transcription machinery [BR:plat03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C6W10_24710
DNA repair and recombination proteins [BR:plat03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C6W10_24710
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(5661087..5664974)
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| AA seq |
1295 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDTEARHRDLATVENEILAEKRQAENSRDSEIEKRAAKLEAD
LAELEAEGAKADVRRKVKEGGEREMRQIRDRAQREIDRLDEVLDTFRKLEPKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALVQNMDLDAEADNLREIIRTGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTPGEIGEGR
VFSSDAEARMAFDNGELHLQTPVKIRLRGVTEVDNGPGASRWTAPEEWVPGEPLTVETTL
GRVLFNETLPQGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDGLKEAGFHWATWSG
VTIGMEDVIAPPRKRDILERYEKEAERIDKQYQRGLMTAEERRGELIEIWTKATNEVAKE
METALPQENPLWKMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPIKASYREGLSVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMQIATQLDGR
LVAHEHVETSVHARTLADDIKGPDGNLVAERGADINTILVDKIVGAGVDTVRVRSVLTCE
SKLGVCGACYGRSLPTGKTVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQGL
PRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIVVPDDGSDEIVYDKISKRVPLQA
HDGDHVDVGQKLTKGTIDPHELLRILGPRAVQVHLTQEVQEVYRSQGVLIHDKHIEIIIR
QMLKRVTVIDSGATEFLPGVLVDRALFESENRRLVSEGGEPAAGRPVLMGITKASLATDS
WLSAASFQETTRVLTDAAIHARSDSLIGLKENVIIGKLIPAGTGISKYRNIRVEPTEEAK
AKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR |
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| NT seq |
3888 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgacgagttgcggattggcctggccaccgccgacgacatc
cgtcagtggtcgcacggcgaggtcaagaagcctgaaacgatcaactaccgcaccctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggtaagtacaagcgggttcggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgctccaaggtgcggcgtgagcggatgggccacatcgagctggccgcgtcg
gtgacgcacatctggtacttcaagggtgtgccgagccggctgggctacctgctcgacctg
gcgccgaaggacctcgaaaagatcatctacttcgcgtcgtacgttgtcaccagcgtcgac
acggaggcgcggcaccgtgaccttgccacggtggagaacgagatcctcgccgagaagcgg
caggccgagaacagccgcgactcggagatcgagaagcgggccgccaagctcgaggccgac
ctggccgagctggaggccgagggtgccaaggccgacgtgcggcgcaaggtcaaggagggc
ggagagcgcgagatgcgccagatccgcgaccgggcgcagcgcgagatcgaccgcctcgac
gaggtgctggacaccttccgcaagctggagccgaagcagctcgtcaccgacgaactgctc
taccgcgagctgcgggaccggttcggcgagtacttcaccggtgggatgggcgcggaggcg
atcaaggcgctggtccagaacatggacctggacgccgaggccgacaacctccgcgagatc
atccgtaccggcaaggggcagcggaagatccgggcgctcaagcggctcaaggtcgtggcg
gcgttcctgaacacccgcaactcgccgctcgggatggtgctggactgcgtaccggtgatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccggttcgcgacctcggacctg
aacgacctctaccggcgtgtgatcaaccggaacaaccggctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggacgcg
ctcttcgacaacggtcgtcggggtcgtccggtcaccggcccgggcaaccggccgctgaag
tcgctgtcggacatgctcaagggcaagcagggccgattccggcagaacctgctcggcaag
cgggtcgactactccggtcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcacagaacatcaagtccgccaagcggatggtcgagcggcagcgg
ccggtcgtctgggacgtgctggaagaggtcatcggcgagcacccggtactgctgaaccgg
gcgccgaccctgcaccggctgggcatccaggcgttcgagccgcagctcgtcgagggcaag
gcgatccagatccacccgctggtctgcaccgcgttcaacgcggacttcgacggcgaccag
atggcggtacacgtgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctc
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggtctctaccacctcacccacctcaccccgggtgagatcggcgagggtcgg
gtgttcagctcggacgccgaggcgcgaatggcgttcgacaacggcgaactgcacctgcag
accccggtgaagatccggctgcgcggtgtgaccgaggtggacaacgggcccggcgcttcg
cggtggaccgctccggaggagtgggtaccgggtgagccgctgaccgtggagaccacgctg
gggcgggtgctcttcaacgagaccctgccgcagggctaccggttcgtgaactacgagatc
cgcaaggggcagctctccgcgatcgtcaacgatctcgccgagcggttcccgaaggtggcg
ctggccgcgacgctcgacgggctcaaggaggccggtttccactgggccacctggtccggc
gtgacgatcggcatggaggacgtcatcgcgccgccgcgcaagcgggacatcctggagcgg
tacgagaaggaagccgagcggatcgacaagcagtaccagcggggtctgatgaccgccgag
gaacgtcgcggcgaactcatcgagatctggaccaaggcgaccaacgaggtcgccaaggag
atggagaccgcgctgccgcaggagaacccgctgtggaagatgatcaactcgggtgcccgc
ggtaacctgctccagctccgccagatcgccgcgatccgtggtctggtggccaacccgaag
ggcgagatcatcccgcggccgatcaaggccagctaccgggagggtctctccgtactggag
tacttcatctccacgcacggtgcccggaagggtctcgccgacacggcgctgcgtaccgcc
gactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatcatccgcgag
gaggactgcggcaccgaccgcgccatcccgatgcagatcgcgacccagctcgacggcagg
ctggtggcacacgagcacgtggagaccagcgtgcacgcccgtaccctggccgacgacatc
aaggggccggacggcaacctggtcgccgagcggggtgcggacatcaacacgatcctggtc
gacaagatcgtgggggccggggtggacaccgtacgggtccgcagcgtgctcacctgcgag
tccaagctcggcgtctgcggggcctgctacggccgctcgctgccgacgggcaagaccgtg
gacgtcggcgaggcggtcggcatcatcgccgcccagtcgatcggtgagccgggcacgcag
ctcacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggtctg
ccccgggtccaggagattttcgaggcccgggtcccgaagggcaaggcgccgatcgccgac
accccgggccggatccggatcgaggacggcgagcggtcgcgcaagatcatcgtggtgccg
gacgacggcagcgacgagatcgtgtacgacaagatctccaagcgggtgccgctccaggca
cacgacggtgatcacgtcgacgtcggccagaagctgaccaagggcaccatcgacccgcac
gagctgctgcggatcctcggcccgcgggcggtccaggtccacctgacccaggaggtccag
gaggtctaccggtcgcagggtgtgctcatccacgacaagcacatcgagatcatcatccgc
cagatgctcaagcgggtgacggtgatcgactccggcgcgaccgagttcctgccgggtgtg
ctggtcgaccgggcgctcttcgagtcggagaaccgccgactcgtctccgagggcggcgag
cccgcggcgggccggccggtgctgatgggtatcaccaaggcctcgctggccacggactcg
tggctgtcggcggcctccttccaggagaccacccgggtgctcaccgacgcggcgatccac
gcccggagcgactcgctgatcggtctcaaggagaacgtcatcatcggtaagctcatcccg
gccggtacgggcatcagcaagtaccgcaacatccgggtcgagccgaccgaggaggcgaag
gccaaggtctactcgatgaccggctacccggagaccgactacgggttcgggccggccagc
ggccaggctgtgccgctggacgacttcgacttcgggtcgtaccgctga |
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