Plantactinospora sp. BB1: C6W10_25420
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Entry
C6W10_25420 CDS
T05391
Name
(GenBank) hypothetical protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
plat
Plantactinospora sp. BB1
Pathway
plat02020
Two-component system
plat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C6W10_25420
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6W10_25420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plat03000
]
C6W10_25420
Transcription factors [BR:
plat03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
C6W10_25420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HVO_A0261_N
GntR
MarR_2
HTH_24
TrmB
MarR
HTH_IclR
Crp
HTH_20
RP-C
HTH_36
Rrf2
HTH_Cmi2_C
RepL
HTH_5
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AVT39228
LinkDB
All DBs
Position
complement(5809406..5810083)
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AA seq
225 aa
AA seq
DB search
MEATDLRRLADVPVFAGLGPARLRRLLDRSAPRTVRPGVVLAVRGQPAEHVIVVEAGTLT
GVHETADGKRLRLGDFVGPCAVDKSAVLDGGGYTATWLAATVLRYRLVPAGELLRLIDDV
PAVRRHVLGHLAGRLRDRQAELVRTSYADAGTRVAAWLVAAAGRSGRRVPLPGAQQGLAE
SVGMTRVTVNRALRTLADAGLVRVEPGAVVVLAPELLAARATAAS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgacggacctgcgacgactcgccgacgtacccgtcttcgccgggctcgggccg
gcgcggctacgccggctgctcgaccgttccgcgccgcgaaccgtccggcccggcgtggta
ctggcggtacgcggacagcccgccgagcacgtgatcgtggtggaggcgggcaccctgacc
ggggtgcacgagacggccgacgggaagcggctgcggctcggcgacttcgtcggcccgtgc
gcggtcgacaagagcgcggtgctggacggcggcgggtacacggcgacctggctggccgcc
accgtgttgcgctaccggctggtgccggccggcgagctgctccggctgatcgacgacgta
ccggcggtgcggcggcacgtactcggacacctggccgggcggctgcgggaccggcaggcg
gagctggtgcgcacctcgtacgccgatgccgggacccgggtggcggcctggctggtcgcg
gcggccggccggagcgggcgccgggtgccgctccccggcgcgcagcaggggctggcggag
tcggtcgggatgacccgggtgacggtcaaccgggcgctgcggaccctcgccgacgccggg
ctggtccgggtcgagccgggtgcggtggtggtgctggcacccgaactcctggcggcgcgc
gccacggcggcgagctga
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