Plantactinospora sp. BB1: C6W10_33435
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Entry
C6W10_33435 CDS
T05391
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
plat
Plantactinospora sp. BB1
Pathway
plat00040
Pentose and glucuronate interconversions
plat01100
Metabolic pathways
plat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C6W10_33435
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C6W10_33435
Enzymes [BR:
plat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
C6W10_33435
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AVT42023
UniProt:
A0A2R4FWW1
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All DBs
Position
complement(7633719..7634657)
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AA seq
312 aa
AA seq
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MLVPAGPADGFASVDALGQNGTTGGAGGPVVTVNSTAAFLDYIARPGPYVIQVAGTITLP
TGDSDGMHDVTSDKTIVGIGANATLRGGGLNIGLPVNDDTTAPPANAVHNVIIRNLHLTG
ATDDLLNVQMFSHHIWIDHNEFSNGDDGAVDIKRGSDYVTVSWNHFHDHDKTLLLSHDED
AGAQDIGRLRVTYHHNWFNASDQRHPRVRFSAMTHVYNNYYYENSYGVASTYDAAVLVEE
NYFYSVNNPGRVEFSGDLGRIVERGNILVDCNHPIETRGTVPEPSGFYRYQADDAAAIPT
IVPAGAGVGKLG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgccggcgggcccggcggacggcttcgccagcgtcgacgcgctcggccagaac
ggcaccaccggcggcgccggtggaccggtcgtcaccgtgaacagcaccgccgcgttcctc
gactacatcgcccgacccggcccgtacgtcatccaggtcgccggcaccatcaccctgccg
accggcgacagcgacggcatgcacgacgtcacctcggacaagacgatcgtgggcatcggg
gcgaacgccaccctgcgcggcggcggcctcaacatcggcctgccggtgaacgacgacacc
accgcaccgccggccaacgcggtacacaacgtgatcatccggaacctgcacctcaccggg
gccaccgacgacctgctcaacgtgcagatgttctcgcaccacatctggatcgaccacaac
gagttctccaacggcgacgacggcgcggtcgacatcaaacgcggctcggactacgtcacc
gtctcgtggaaccacttccacgaccacgacaagaccctgctgctctcgcacgacgaggac
gccggcgcccaggacatcgggcggctgcgggtcacctaccaccacaactggttcaacgcc
tccgaccagcggcacccccgggtccgcttctcggccatgacgcacgtctacaacaactac
tactacgagaacagctacggggtggcctccacctacgacgccgccgtgctggtcgaggag
aactacttctacagcgtcaacaaccccggccgggtcgagttcagcggcgacctgggccgg
atcgtcgaacgcggcaacatcctggtcgactgcaaccacccgatcgagacccggggcacg
gtacccgagccgagcggcttctaccgctaccaggccgacgacgcggccgccatcccgacc
atcgtcccggccggtgccggggtgggaaagctgggctga
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