Plantactinospora sp. BB1: C6W10_35000
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Entry
C6W10_35000 CDS
T05391
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
plat
Plantactinospora sp. BB1
Pathway
plat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6W10_35000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plat03400
]
C6W10_35000
DNA repair and recombination proteins [BR:
plat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C6W10_35000
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C6W10_35000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF3724
Motif
Other DBs
NCBI-ProteinID:
AVT40797
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Position
complement(7977819..7978658)
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AA seq
279 aa
AA seq
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MPGYRRQLYRDDAVVLRVQKLGESDRIITLLTRRHGRLRAVARGVRRTTSRFGARLEPFG
HVDLQIAGDPKGEQGSSLHSISQVEGIALYGKAFVSDYPRYTAASAIAETAERLTPVERE
PSLRLFQLTLGGLRALADGEHASTLVLDAYLLRGMGLAGWAPALVACAVCGTPGRHGAFS
VPAGGCVCPDCRPPGAAHPAPATLDLMAALASGDWRTADAAEPPHRRECSGLVAAHLQWH
LERGLRSLPLVDRGSTGERTERARHLPRPDPADVAKEAQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgggtaccgccgacagctctaccgcgacgacgcggtggtgctgcgcgtgcagaaa
ctcggcgagtccgaccggatcatcaccctgctgacccgccggcacggccggctgcgggcg
gtcgcccggggggtacgccggaccacctcgcggttcggtgcccggctggagccgttcggc
cacgtcgacctccagatcgccggtgacccgaagggcgagcagggcagctcgctgcactcg
atcagccaggtggaggggatcgcgctctacggcaaggcgttcgtctccgactatccccgc
tacacggcggcgagcgcgatcgccgagacggcggagcggctcaccccggtcgagcgggag
ccgtcgctgcggctgttccagctcaccctgggcgggctgcgcgcgctcgccgacggtgag
cacgccagcacgctggtgctggacgcctacctgctgcgcgggatggggctggccggctgg
gcaccggcgctggtcgcctgcgcggtctgcggtacgccgggccggcacggcgcgttctcc
gtacccgccgggggttgtgtctgcccggactgccggccgcccggcgccgcccatccggcg
ccggccaccctcgacctgatggccgcgctcgcctccggggactggcggaccgcggacgcc
gccgagccgccgcaccgccgggagtgcagcgggctggtggcggcacacctgcaatggcat
ctggagcgggggttacgctccttgccgctggtcgacaggggatcgaccggtgagcggacc
gagcgggcgcggcacctcccgcgccccgacccggcggacgtagcgaaggaagcacagtga
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