Pseudomonas lalucatii: I0D68_11420
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Entry
I0D68_11420 CDS
T10193
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plau Pseudomonas lalucatii
Pathway
plau00260
Glycine, serine and threonine metabolism
plau00630
Glyoxylate and dicarboxylate metabolism
plau00670
One carbon pool by folate
plau00680
Methane metabolism
plau01100
Metabolic pathways
plau01110
Biosynthesis of secondary metabolites
plau01120
Microbial metabolism in diverse environments
plau01200
Carbon metabolism
plau01230
Biosynthesis of amino acids
plau01240
Biosynthesis of cofactors
plau04981
Folate transport and metabolism
Module
plau_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
I0D68_11420
09102 Energy metabolism
00680 Methane metabolism
I0D68_11420
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I0D68_11420
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
I0D68_11420
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
I0D68_11420
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
I0D68_11420
Enzymes [BR:
plau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
I0D68_11420
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
DUF7337
Motif
Other DBs
NCBI-ProteinID:
QVM86522
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Position
2410511..2411764
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDELLAAMNAEEARQEHHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKQLFGADFANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGSKVSSSGKLYNAVQYGLDTATGLIDYDEVERLAVEHQPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNPEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPEFKEYQAQVIKNAQAMAK
VFIERGFDVVSGGTDNHLFLLSLIKQGLTGKDADAALGRVGITVNKNSVPNDPQSPFVTS
GLRIGTPAVTTRGFKEAQCVALAGWICDVLDHLGDADVEAQVAKLAAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacaagatcaaatccaaggctacgacgacgaactgctggcggcgatgaac
gccgaagaagcgcgtcaggagcaccacatcgagctgatcgcctcggaaaactacaccagc
aagcgcgtcatgcaggcccagggcagcggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggcggctgcgagcacgtcgacgtggtcgagcagctggccatcgac
cgcgccaagcagctgttcggcgccgatttcgccaacgtccagccgcactccggctcctcg
gccaacagcgccgtgtacctggccctgctcaacgccggcgacaccatcctgggcatgagc
ctggcccatggcggccacctgacccatggttccaaggtcagctcctccggcaagctgtac
aacgccgtgcagtacggcctggacaccgccaccgggctgatcgactacgacgaagtcgag
cgcctggccgtggagcaccagccgaagatgatcgtcgccggcttcagcgcctactccaag
accctggacttcccgcgcttccgcgccatcgccgacaaggtcggcgcgctgctgttcgtc
gacatggcccacgtcgccggcctggtcgccgccggcctgtacccgaacccgctgccctac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccccgtggcggtctgatc
ctggccaagagcaacccggagatcgagaagaagctcaacgccgcggtgttccccggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaggccctg
gagcccgagttcaaggagtaccaggcccaggtgatcaagaacgcccaggccatggccaag
gtgttcatcgagcgcggcttcgacgtggtctccggcggcaccgacaaccacctgttcctg
ctcagcctgatcaagcagggcctgaccggcaaggatgccgacgccgccctgggccgcgtc
ggcatcacggtgaacaagaactcggtgccgaacgacccgcagtcgccgttcgtcacctcg
ggcctgcgcatcggcaccccggcggtgaccacccgcggcttcaaggaggcccagtgcgtc
gccctggccggctggatctgcgacgtcctcgaccacctcggcgacgccgacgtcgaggcc
caggtcgccaagctggccgctggcctgtgcgcggactacccggtctatcgttga
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