Pseudomonas lalucatii: I0D68_13470
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Entry
I0D68_13470 CDS
T10193
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
plau Pseudomonas lalucatii
Pathway
plau02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I0D68_13470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plau02022
]
I0D68_13470
02035 Bacterial motility proteins [BR:
plau02035
]
I0D68_13470
Two-component system [BR:
plau02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
I0D68_13470
Bacterial motility proteins [BR:
plau02035
]
Pilus system
Twitching motility proteins
I0D68_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
AAA_19
AAA_5
Pre_tape_measure
HTH_30
AAA_22
VpsR
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QVM86743
LinkDB
All DBs
Position
complement(2799654..2800991)
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AA seq
445 aa
AA seq
DB search
MNRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAKEPFDLCLTDMRLPDG
SGLDLVQHIQQRHPQVPVAMITAYGSLDTAINALKAGAFDFLTKPVDLGRLRELVAAALR
LHTTEGESTPVDSRLLGDSPPMQTLRKQILKLARSQAPVYISGESGSGKELVARLIHEQG
PRSEQPFVPVNCGAIPSELMESEFFGHKKGSFTGAVEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEAVVDVRILCATHKDLAAEVAAERFRQDLYYRLNVIE
LRVPPLRERREDIARLAEAMLKRLAEGTGLNAARLETEALEKLKNYRFPGNVRELENMLE
RAYTLCEDDCIRAGDLRLADASPGGENGEASLAQIDNLEDHLEDIERKLIMQALEETRWN
RTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccagagagccctgatcgtcgacgacgagcccgatatccgcgaactcctggag
atcaccctggggcgaatgaagctcgacacccgcagcgcgcgcaacgtcaaggaggcgcgc
gagtggctggccaaggagcccttcgacctgtgcctgaccgacatgcgcctgcccgacggc
agcggcctggacctcgtgcagcacatccagcagcgccacccccaggtgcccgtggcgatg
atcaccgcctacggcagcctggacaccgcgatcaacgcgctcaaggccggcgccttcgac
ttcctgaccaagccggtggacctgggccgcctgcgcgagctggtcgccgcggccctgcgc
ctgcacaccacggagggcgaaagcacgccggtggacagccgcctgctcggcgactcgccg
cccatgcagacgctgcgcaagcagatcctcaagctcgcccgcagccaggccccggtgtac
atcagcggcgaatccggcagcggcaaggagctggtcgcccgcctgatccacgagcagggg
ccgcgcagcgaacagccgttcgtgccggtcaactgcggcgccattccctcggagctgatg
gaaagcgaattcttcggccacaagaaaggcagcttcaccggcgccgtcgaggacaaacaa
gggctgttccaggccgccaatggcggcaccctgttcctcgacgaggtcgccgacctgccg
ctgccgatgcaggtcaagctgctgcgggcgatccaggagaaggccgtgcgcgccgtcggc
ggccagcaggaagcggtggtcgatgtgcgcatcctctgcgccacccacaaggacctggcc
gcggaagtggccgccgaacgcttccgccaggacctgtactatcgcctcaacgtcatcgaa
ctgcgcgtgccgccgctgcgcgagcgtcgcgaagacatcgcccgcctggccgaggccatg
ctcaagcgcctcgccgaaggcaccggcctgaacgccgcccggctcgagaccgaggccctg
gagaagctcaagaactaccgcttccccggcaacgtgcgtgaactggagaacatgctcgag
cgcgcctataccctgtgcgaggacgactgcatcagggccggcgacctgcgcctggccgac
gccagcccgggcggcgagaatggcgaggccagcctggcgcagatcgacaacctggaagac
cacctggaggacatcgagcgcaagctgatcatgcaggccctggaagagacccgctggaac
cgcaccgccgccgcccagcgcctgggcctgaccttccgctcgatgcgctaccggctgaag
aagctggggatcgactga
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