Pseudomonas lalucatii: I0D68_14590
Help
Entry
I0D68_14590 CDS
T10193
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
plau Pseudomonas lalucatii
Pathway
plau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I0D68_14590 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plau03019
]
I0D68_14590 (rhlB)
Enzymes [BR:
plau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I0D68_14590 (rhlB)
Messenger RNA biogenesis [BR:
plau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I0D68_14590 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QVM86866
LinkDB
All DBs
Position
complement(3038652..3039785)
Genome browser
AA seq
377 aa
AA seq
DB search
MHAIHDLGFPYCTPIQAGVLGYTLKGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPRER
YMGEPRALIIAPTRELVVQIANDAIGLTKYSGLNVMQFVGGMDFDKQLKQLESRFCDILV
ATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPMKGERQTLLFSA
TFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVASADKYKLLYNLITQNDWNRV
MVFANRKDEVRRIEERLTRDGISAVQMSGDVPQHKRIRALEGFREGKIKVMVATDVAGRG
IHVEGISHVINFTLPEDPDDYVHRIGRTGRAGSSGTSISFAGEDDAFALPPIEELLGRKI
NCEMPPDELLKPVPRKH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccatccacgacctcggtttcccctactgcacgccgatccaggccggcgtactg
ggttacaccctcaagggccaggacgccatcggccgcgcccagaccggcaccggcaagacc
gcggccttcctcatctcgatcatcacccagctgctgcagaccccgccgccgagagaacgc
tacatgggcgagccacgggcgctgatcatcgccccgacccgcgagctggtggtgcagatc
gccaacgatgccatcggcctgaccaagtacagcggcctgaacgtcatgcagttcgtgggc
ggcatggacttcgacaagcagctcaagcaactggaatcgcgcttctgcgacatcctggtg
gccaccccgggccgcctgctggacttcaaccagcgcggcgaggtgcacctggacatggtc
gaggtgatggtgctggacgaggccgaccgcatgctcgacatgggtttcatcccccaggtg
cggcagatcatccgccaaaccccgatgaagggcgagcgccagaccctgctgttctccgcc
accttcaccgacgacgtgatgaacctggccaagcagtggacggtcgacccggccatcgtc
gagatcgagccggagaacgtcgccagcgacaccgtcgagcagcacgtctacgccgtcgcc
agcgccgacaagtacaagctgctgtacaacctgatcacccagaacgactggaaccgggtg
atggtcttcgccaaccgcaaggacgaggtacggcgcatcgaggagcgcctgacccgcgac
ggcatcagcgccgtgcagatgtccggcgacgtgccgcagcacaagcgcatccgcgccctg
gaaggcttccgcgaaggcaagatcaaggtgatggtggccaccgacgtggccggccgcggc
atccacgtcgaaggcatcagccacgtgatcaacttcaccctgccggaagacccggacgac
tacgtgcaccgcatcggccgcaccggccgcgccggcagcagcggcacctcgatcagcttc
gccggcgaggacgacgccttcgccctgccgccgatcgaggagttgctcgggcgcaagatc
aactgcgagatgccgccggacgagttgctcaagccggtgccgcgcaagcactga
DBGET
integrated database retrieval system
