Pseudomonas lalucatii: I0D68_21310
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Entry
I0D68_21310 CDS
T10193
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
plau Pseudomonas lalucatii
Brite
KEGG Orthology (KO) [BR:
plau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plau03032
]
I0D68_21310
03036 Chromosome and associated proteins [BR:
plau03036
]
I0D68_21310
03400 DNA repair and recombination proteins [BR:
plau03400
]
I0D68_21310
DNA replication proteins [BR:
plau03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I0D68_21310
Chromosome and associated proteins [BR:
plau03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I0D68_21310
DNA repair and recombination proteins [BR:
plau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I0D68_21310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
SSPI
HTH_IclR
DUF7387
HTH_20
HTH_30
TrmB
Motif
Other DBs
NCBI-ProteinID:
QVM87558
LinkDB
All DBs
Position
4441742..4442020
Genome browser
AA seq
92 aa
AA seq
DB search
MAMTKDQLISDIAEAIDTPKSTVRAALEQLSEIVSDALENGDEITLPGIGKLKVGERPAR
TGRNPQTGKAIEIAAKKVVKYVPAKALTDAIN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaccaaagaccagctgatcagcgatatcgccgaagccatcgacaccccgaag
agcaccgtgcgtgctgccctcgagcaactcagcgagatcgtcagcgacgccctggaaaat
ggcgacgaaatcaccctgcctggcatcggcaagttgaaggtcggcgaacgtccggcccgc
accggccgcaacccgcagacgggcaaggcgatcgagatcgcggcgaagaaggtggtcaag
tacgtgccggccaaggccctgaccgacgcgatcaactaa
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