KEGG   Pseudomonas lalucatii: I0D68_21310
Entry
I0D68_21310       CDS       T10193                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
plau  Pseudomonas lalucatii
Brite
KEGG Orthology (KO) [BR:plau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plau03032]
    I0D68_21310
   03036 Chromosome and associated proteins [BR:plau03036]
    I0D68_21310
   03400 DNA repair and recombination proteins [BR:plau03400]
    I0D68_21310
DNA replication proteins [BR:plau03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    I0D68_21310
Chromosome and associated proteins [BR:plau03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    I0D68_21310
DNA repair and recombination proteins [BR:plau03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      I0D68_21310
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 SSPI HTH_IclR DUF7387 HTH_20 HTH_30 TrmB
Other DBs
NCBI-ProteinID: QVM87558
LinkDB
Position
4441742..4442020
AA seq 92 aa
MAMTKDQLISDIAEAIDTPKSTVRAALEQLSEIVSDALENGDEITLPGIGKLKVGERPAR
TGRNPQTGKAIEIAAKKVVKYVPAKALTDAIN
NT seq 279 nt   +upstreamnt  +downstreamnt
atggccatgaccaaagaccagctgatcagcgatatcgccgaagccatcgacaccccgaag
agcaccgtgcgtgctgccctcgagcaactcagcgagatcgtcagcgacgccctggaaaat
ggcgacgaaatcaccctgcctggcatcggcaagttgaaggtcggcgaacgtccggcccgc
accggccgcaacccgcagacgggcaaggcgatcgagatcgcggcgaagaaggtggtcaag
tacgtgccggccaaggccctgaccgacgcgatcaactaa

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