Planomicrobium sp. Y50: DNR44_001615
Help
Entry
DNR44_001615 CDS
T06390
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
play
Planomicrobium sp. Y50
Brite
KEGG Orthology (KO) [BR:
play00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_001615
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DNR44_001615
Archaeal homologous recombinant proteins
DNR44_001615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
AAA_21
ABC_tran
DUF2704
Motif
Other DBs
NCBI-ProteinID:
QHJ69406
LinkDB
All DBs
Position
complement(322630..325722)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPLKLKLTAFGPYKETETIDFNDLRENRLFVISGSTGSGKTTIFDGISFALYGAASGSD
RSETRNLRSDFADDAVHTCVEMEFEIHNQVYRILRQMPHVKKGNKSQTGERYEFFEVHKD
GEKPCVERQIVSEINQRVEEILGLTQNQFSQIVMLPQGEFRKLLTSETDNKEEILRRIFK
TEPYKMISERLKQKRDAAKDAYGLEEQVLNSHLRSIESSLPERESELFEVLGREQRNIHQ
LLSALELETAFYKEKIADDKIRHETLYKKHQEKLESYHEAKKWNGRFDEKLEKERRYNAL
TEQLPAIAGKEKAVQQAERAGFIANIENLYRELQVNETEKHKLLERAVDEEQQAEGAKLA
AEEKFLEQQGRSAERSAAQDQVLRLQQLLPQVQDLAAKEKEVANLSSAVQDAEQRFQAIE
KQLAAKKEQKTAVAEKVSELEKQTDSFDSKPEELRVAEDRLRIARELLAVQTEMKAQKAV
TDQKEVVYSEALTKYKGIEEGWFANQAHLLAEQLKDGEACPVCGSHEHPVKHQGAAETAV
SKEQLDQEKSLLNTLDDAYRNAAARLVSLEEQLSRKQSEAEEQGIAAADTDKEVASLEQV
KQQLQEDVQTLQRWKTGLREWKTKLTDLVKEMETAEQNRSLLLTEMNDKKSASESAKAVL
AEKLASIPEEMRSLAVLEQEIRQAIAKKDDMERVWTAVQELFQGAKERLASAAMALQHSK
TTAEEMTAKRQKAEAEFKQALEKSEFETEEAYQRAKMRDSEMEEMKQQITRFKQDRHTLE
QQISELAELLAERKNEDLSLAEAELEQLKVDYEQALSQLNHSKDCCAKGEALIEQINGTV
EKAAKAEAQFNRVADLHDMIRGQNSLKISFERYLQIEYLEQIIQAANERLRNLSNGQFYL
IRSDRQEARGKQSGLGLDVYDSYTGQTRDVKTLSGGEKFNASLCLALGMADVIQSFQGNV
SIDTMFIDEGFGSLDEESLNKSIETLIDLQRSGRMIGVISHVQELKAAIPAILEVRKSKE
GFSKTSFHIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagacctttaaaactgaaactgacggcatttggcccatataaagagacggaaacaatc
gattttaatgacctccgggaaaatcggctgtttgttatttccggcagcacgggttccggc
aaaacgacgatttttgacgggatctcatttgcgctgtacggtgctgcaagcggttcggac
cgcagtgaaacacgcaatctgcggagtgatttcgcggatgatgctgtgcatacctgtgtc
gaaatggaatttgagatacataaccaggtataccggattcttcgccagatgccccatgtc
aaaaaagggaataaaagccagactggtgaacgctatgaattttttgaagtccataaagat
ggcgaaaagccatgtgtggaacggcagatcgtatcggaaatcaaccagcgcgtcgaagag
attctagggttgacgcaaaatcagttcagccagattgtcatgttgccgcaaggggaattc
cgtaaactgttgacgtcagaaacagataataaggaagaaattcttcgccgtatttttaaa
acagaaccgtataaaatgatcagcgaacggctgaagcaaaagcgcgacgcggcaaaagat
gcctatggactagaagaacaggtgctgaacagccatctgcgcagcatcgaatcttcgctt
ccggaacgggaatccgaattgttcgaagtgctggggagagagcagcgcaatatccaccag
ctcctgtcggcacttgaactggaaacggctttctataaagaaaaaatcgctgatgacaaa
atccggcatgaaacgctgtacaaaaaacatcaggaaaaactggaaagctatcacgaagcg
aaaaagtggaacggacgctttgatgaaaagctcgaaaaagagcggcgttacaacgcttta
acggaacagctgccggcaatcgctggaaaagaaaaagcggtgcagcaggcggagcgcgct
ggttttattgccaatatcgaaaatctttaccgggaacttcaagttaatgaaacggaaaaa
cacaaactgctcgaacgggcggtggatgaagaacagcaagccgaaggggcaaaactggcg
gcagaagagaaattcctggaacagcagggccgcagcgctgaacgatcggctgcccaggat
caggtgctgcgccttcagcaattattgccgcaggtacaggatttggcggctaaagaaaaa
gaagttgccaatttgagcagcgcggtccaggatgccgaacagcgttttcaggcaatcgaa
aaacaattggccgctaaaaaagagcagaaaacagccgttgccgaaaaggtcagtgagctg
gagaaacaaaccgacagctttgacagcaagccggaagaacttcgggtcgcagaggatcgt
ctgcgcattgccagggaattgctggccgtgcaaacggaaatgaaagcccaaaaagcagtg
actgatcaaaaagaagtggtatacagcgaagcgctgacaaaatacaaagggatcgaagag
ggctggtttgccaatcaggcgcatcttttggctgagcaattgaaagacggtgaggcctgc
ccggtatgcggcagccacgagcatcctgtaaaacaccagggagcagcggaaacggctgtt
tcaaaagagcagctggaccaggaaaaatccctgttgaatacgctggatgatgcttaccga
aatgctgctgcacgccttgtttcattggaagagcagttgagccgcaagcagagcgaggca
gaagagcaggggattgcggcagcggataccgataaagaagtcgcctcactggagcaagtc
aaacagcaattgcaggaagatgttcaaactctgcaacgatggaaaacgggacttcgcgag
tggaaaacgaaacttacggatttggtgaaagagatggagacagcggagcagaaccgctcg
ctcctcctgacggaaatgaatgacaagaaatccgcttctgaatcggcgaaagcagtgctg
gctgaaaaactggcatcgataccggaagaaatgcgctcgcttgctgttctggaacaggaa
atccgtcaggccatcgctaaaaaggacgatatggaaagagtctggactgcggtgcaggaa
ttattccagggagcgaaagaacgattggcttcagcggcaatggcgttgcagcattcgaaa
accacagccgaagaaatgaccgccaaacgccaaaaagcggaagcggaattcaagcaggca
ctggagaaatcggaattcgaaacggaagaagcttaccagcgggcgaaaatgcgcgactcg
gaaatggaagagatgaaacagcaaatcacgcgtttcaaacaggaccgccacacacttgaa
cagcaaatcagcgaactggctgaacttttggcagaacgcaaaaacgaagacttgtcactg
gcggaagcggaactggagcaattgaaagtcgattatgaacaggcgttatcgcagttgaat
cattcgaaggattgctgcgcaaaaggcgaagcattgattgagcagatcaatggaactgtt
gaaaaagcggctaaagccgaagcacaatttaatcgtgtggcggatcttcacgatatgatc
cgtgggcagaacagcctcaaaatctcatttgaacgttatttgcagattgaatacctggaa
cagattattcaagccgccaacgagcggctgcgtaatctgtcgaatggccagttctatctg
atccggagcgaccggcaggaagcccgcggcaaacagagcggcctcggcctcgatgtctac
gattcctatacggggcagacgcgcgacgtcaaaactttatccggcggagaaaaattcaat
gcatcgctttgtctggcgcttggcatggcagacgtcatccaaagcttccagggcaatgtc
tccatcgacacgatgttcatcgatgaaggatttggttcactcgatgaagagtcgttgaac
aaatcaatcgaaacattgattgatttgcagcggtcgggccgtatgatcggcgtcatttcg
catgtgcaggaattgaaggcggcgataccggcgattctggaagtaagaaagtcgaaggaa
ggcttcagtaaaacaagtttccatattaaatag
DBGET
integrated database retrieval system
