Planomicrobium sp. Y50: DNR44_006015
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Entry
DNR44_006015 CDS
T06390
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
play
Planomicrobium sp. Y50
Pathway
play00750
Vitamin B6 metabolism
play01100
Metabolic pathways
play01240
Biosynthesis of cofactors
Module
play_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
play00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DNR44_006015 (pdxS)
Enzymes [BR:
play01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DNR44_006015 (pdxS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
IGPS
NanE
NMO
TetR_C_27
IMPDH
TMP-TENI
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
QHJ70183
LinkDB
All DBs
Position
complement(1149041..1149925)
Genome browser
AA seq
294 aa
AA seq
DB search
MNQQGTNRVKRGMAEMQKGGVIMDVVNAEQARIAEAAGATAVMALERVPSDIRRDGGVAR
MADPRITEEVMKAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLLKER
YTVPFVCGCRNLGEAARRIGEGASMLRTKGEPGTGNIVEAVRHLRQVNSEVLKVVHMSED
ELMTEARNLGASYEFLREVKSLGRLPVVNFAAGGVATPADAALMMELGADGVFVGSGIFK
SESPEKFARAIVEATTHYQDYQLIAELSKNLGIAMQGIEISKIAAGERMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacaaggaacaaatcgtgtaaaaagaggcatggctgaaatgcaaaaaggcggt
gtgatcatggatgtcgtaaatgcggagcaggcacgtattgccgaggcagcaggagctact
gctgtcatggctttggaacgtgtaccttcagatatccgcagagacggcggtgttgcccgc
atggctgatccccgcataaccgaggaagtgatgaaggctgtttcgattcccgttatggca
aaagcacgtattggacatattgttgaagcgcgggtgcttgaagcgatgggtgtcgactat
atcgacgaaagcgaggtcctgactccggctgatgaagagttccatttattaaaggagcgt
tacacagtgccttttgtctgcggttgccgcaacttgggagaagcagccagacggattggt
gaaggtgcctccatgcttcggacaaaaggcgagccaggaacaggaaatattgtggaagct
gttcgccatctgcgccaagtcaattctgaagtcttgaaagtggttcatatgagcgaagac
gaattgatgacagaagcacggaatttaggtgcatcctatgaatttctccgtgaagtaaaa
tcactgggacgcttaccggtagtcaattttgctgccggaggggttgctacacctgcagat
gccgcattgatgatggaattgggtgctgatggagtctttgtcgggtccggaatcttcaaa
tcggaaagtcctgaaaaattcgcgcgtgcaatagtagaagcgactacacattatcaggat
taccaattgattgcggaattatccaaaaatcttggaatcgctatgcaaggtatagaaatt
tctaaaatcgccgctggtgaacgcatgcaggaacgaggctggtag
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