Planococcus halotolerans: DNR44_006990
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Entry
DNR44_006990 CDS
T06390
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
play
Planococcus halotolerans
Pathway
play03420
Nucleotide excision repair
play03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
play00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNR44_006990
03430 Mismatch repair
DNR44_006990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_006990
Enzymes [BR:
play01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNR44_006990
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNR44_006990
MMR (mismatch excision repair)
Other MMR factors
DNR44_006990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHJ70362
LinkDB
All DBs
Position
1351434..1353563
Genome browser
AA seq
709 aa
AA seq
DB search
MTDFFERKKQQLGVELNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRTGYLIEEKNIAP
HRIKAITFSKASADDMRERFKRFFPELAPVDFSTIHSLAFRITREYLAGSSYLMIEGNET
NGLHKKRLLKEMYQTENDEPATEDQLEELMSFISFVKNKMLPRERWSALKEPFTGAVEIL
KTYEAFKENHDTRLVDFDDMLTLANEALEKDAAILSKYQKKWDYVMTDESQDTSLVQHSI
VEKLVERHQNLCVVADDDQSIYTWRAAEPTYLLKFKDVYPNAYIMKMERNYRSSGTIVNA
SNLFIKANKKRHDKNMFTKQEEGPPIILKRLSSEEDQLKYLMKQLTQLDHFGDVAILYRN
NSSSTLLMSELDRLGIPFYMKDADNRFFSHWIVEDMLNFMRFSLKPERVDIYSKIASKTN
AYWSGSQLRFLSRMKPASTHALDEIPRNVTMKDYQLKIIAEQKKWFEAMRTMKPLKVIRT
IRAELGYDQMLASRAEKFGMRLKYLSQILVTLEQIAEPLSSMMEFAKRLKELEAVTQQAK
AEKTDEMLTLSTFHSAKGLEFERVYMLDLVEGIIPTEEDAEKPDTLEEARRLFYVGMTRA
KKQLELISYGSGSRFIDEVNDIVLPEKVRSAPKRKIAATPVKVKVPDNPNAVDDQESLVE
GATVRHRVFGIGEIVERDHERISIQFAKERKDLMIDICLSYKLLELING
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttttttgaacggaaaaagcagcagctgggcgtagaattgaataagatccag
cggaaagcggtggaacggacagaagggccgcttcttctgcttgcttgtccgggatcaggc
aagaccactactatgatcatgcgcacaggctatttgattgaagaaaaaaacattgcgccc
caccggatcaaggcgattacgttcagcaaagcatccgcggacgatatgcgcgagcgattc
aagcgcttttttccggaacttgcaccagtggatttttcaaccatccacagtctcgcattc
cggataaccagggagtatctggcaggttccagctatctgatgatcgaaggcaatgaaaca
aacggactgcataaaaagcgcctgctgaaggaaatgtaccagactgaaaacgacgaacct
gcaacagaagatcaattggaagagctcatgtctttcatcagttttgtcaaaaacaagatg
ctgccaagagaacggtggtcggctttaaaggagccttttaccggagcagtggaaattctg
aaaacctacgaagctttcaaggaaaaccatgatacccgcctcgtcgattttgatgacatg
ctgactttggctaacgaagcgcttgagaaggatgcggcgatcttgtccaaataccagaaa
aaatgggattacgtcatgactgacgaaagccaggatacttctctggtccagcattcgatt
gtggaaaaactggtcgaacggcaccagaatctttgtgtggtggcggatgacgaccagtcg
atttacacctggcgtgctgcggaaccgacgtatctgctgaaattcaaggacgtttacccg
aacgcttacattatgaaaatggaacggaattaccggtcttccggaaccatcgtcaatgcg
tcgaacctcttcatcaaagccaataaaaaaaggcatgacaaaaacatgttcaccaaacag
gaggaaggaccgcccataattctgaagcgcctgtcttctgaagaagatcagttgaagtat
ttgatgaagcaactcacacaactggaccacttcggtgatgtggcgatcctttaccgcaat
aattcatcttccactctcttgatgagtgaacttgaccgcctgggcatccctttttatatg
aaagatgcggataaccgctttttctcccactggattgtggaagatatgctcaacttcatg
cgtttcagcctgaaaccggaacgtgtcgacatctattcaaaaatcgcttcgaagacaaac
gcctactggtccggaagccaattgcgctttctgagccgcatgaaaccggcaagcacgcat
gcattggatgaaattccccgaaacgtaacgatgaaggattatcagctgaaaataatcgcc
gaacagaaaaagtggtttgaagccatgcgtacgatgaaacccttgaaagttatccgtact
atccgggcagagcttggctatgatcagatgcttgcaagccgggctgaaaaattcggcatg
cggctgaaatacctttctcaaatccttgtcacacttgagcagattgccgaacctctttct
tcaatgatggaatttgcgaagcgcctgaaggaattggaggcggtgacacagcaagcgaaa
gcggaaaaaactgatgagatgctgaccttgtcgacgttccatagcgctaaaggactcgag
tttgaacgggtgtatatgcttgatctggtggaaggaatcattccgacagaagaagatgct
gaaaaaccggatacgctggaagaagcgcgtcgccttttttacgttggaatgactcgggca
aaaaaacaactggaattgatcagctatggcagtggctcccgttttattgatgaagtgaat
gatattgttctgccggaaaaagtgcggtcagctccaaagcgcaaaattgctgccacaccg
gtgaaagtgaaggttcccgataatcccaatgctgttgacgaccaggaatctctggtcgag
ggggcaacagtgcgccatcgtgttttcggcatcggagaaatagtggagcgggaccatgaa
cgtatttcaatccaatttgcaaaagaaagaaaggacctgatgatcgatatttgtctcagc
tataagttgttggagttgataaacggataa
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