Planococcus halotolerans: DNR44_008855
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Entry
DNR44_008855 CDS
T06390
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
play
Planococcus halotolerans
Pathway
play02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
play00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DNR44_008855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
play03000
]
DNR44_008855
Transcription factors [BR:
play03000
]
Prokaryotic type
Helix-turn-helix
Other families
DNR44_008855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
HTH_3
TPR_8
TPR_19
HTH_19
TPR_MalT
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QHJ70703
LinkDB
All DBs
Position
complement(1776045..1777340)
Genome browser
AA seq
431 aa
AA seq
DB search
MDTGMRLKYHRLKKRMSLEELASGILLPKELKKIESGIKEPGLKDLEALCKKLGISLAPK
DNPVGKVLVKNFKSLLLHPQNKAKIMEQYADIHNHPLLHSDEEIELEYSIQQIRFFIITG
DLDSAEEKMKDIDRFKEFMNQEQFYLFHKYLGNYHYILDEFELALKTYLMAEKISPSTLP
PSEFGDLYYSIGISASQCWEINLANKYSAMALKIYQQEFVPKRIVECHLNIAINERRIGN
YRTAKEHFKYAFTIGNKIDNDFLKFNTEYNYGYYYYQLQNFKSAIIHLENALKFVPEEYT
SDLILDYCVLIKCYIELEDFDSAKNVLQKGENVIKDRNISVDSPSNNQFKEVYIEFMCLK
YFVCNEFDSFVNCLEESLVPILKTHNKHFEIGFYYGHLGNTYIKMGEFEKSAYSLVKAKK
AYKELMAIKEE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggacactggaatgcggctcaaatatcaccgattgaaaaaaagaatgagtttagaagaa
cttgcttccgggattcttcttccgaaagagctgaagaaaattgagtccggcataaaagaa
cctggtcttaaagatcttgaagctttgtgtaaaaaattaggtatttcactggcacctaaa
gacaatccagttggcaaggttttggttaaaaattttaaatccttattattgcatccacaa
aacaaggcgaaaataatggagcaatatgcggatattcataatcatcccttgttacatagt
gatgaagagatagaattggaatacagcattcaacaaattcgttttttcattattactggc
gatttagatagtgctgaagaaaaaatgaaagacatcgatcgctttaaagagtttatgaat
caagaacaattttatcttttccacaaatatcttggaaactaccattacattctcgacgaa
tttgagttggctttgaaaacatatctgatggctgaaaagatatcaccctccactttgccg
ccatctgaatttggagacctgtattactcgataggtatttccgcttcacaatgttgggaa
ataaatttagccaataagtattcagctatggcacttaaaatttatcaacaagagtttgta
cctaaaagaattgttgaatgccatttaaacatcgctattaacgaaagaagaattgggaat
tacagaactgctaaagaacattttaaatacgcttttacaataggtaataaaattgataat
gattttttaaagtttaatacagaatataattatggatattattactatcaactgcaaaat
ttcaagtctgctataattcatttggaaaacgctttaaaatttgtgcctgaagaatatact
tctgaccttatacttgactactgtgttttgattaaatgctatatcgaattagaagacttc
gattcagcaaaaaatgttcttcaaaaaggagagaacgttattaaagatcggaatattagt
gtagattccccttctaataaccagttcaaagaagtatatattgaatttatgtgccttaaa
tattttgtctgtaatgaatttgatagttttgtaaattgtcttgaagaaagtttagtacca
attttaaaaactcataataaacattttgaaataggtttttattacgggcacttaggtaat
acttatattaaaatgggagaatttgaaaaatctgcatattctcttgttaaagcaaaaaaa
gcctataaagaattaatggccattaaagaggagtga
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