Planococcus halotolerans: DNR44_010505
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Entry
DNR44_010505 CDS
T06390
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
play
Planococcus halotolerans
Brite
KEGG Orthology (KO) [BR:
play00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
play03032
]
DNR44_010505 (topA)
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_010505 (topA)
Enzymes [BR:
play01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DNR44_010505 (topA)
DNA replication proteins [BR:
play03032
]
Prokaryotic type
DNA Topoisomerases
DNR44_010505 (topA)
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DNR44_010505 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
Zn_ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QHJ71013
LinkDB
All DBs
Position
2104827..2106896
Genome browser
AA seq
689 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMAVDVENNFEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLANALGVDLDSDCRVVFNEITKDAIKE
SFKQPRKIDMDLVDAQQARRVLDRLVGYSISPLLWKKVKKGLSAGRVQSVALRLVIDREN
EIKEFEPEEYWSITGEFEKAKKKFEAQFYGNANEKMKLENEDDVKAVMATMKGKNFNVNR
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIAVGKEGITGLITYMR
TDSTRISDTAKQDTVRFIEEKYGSDYVTKTAAAKQSSKSQDAHEAVRPTSVMRTPESLKS
ILSRDLYRLYKLIWDRFVASQMSPAVLDTVMAELQNGEAVFRANGSQVKFPGFMKVYVEG
TDDKTDDKDNILPEMEEGDKVKAVAIEPKQHFTQPPPRFTEARLVRTLEELGIGRPSTYA
PTLDTIQKRGYVTLDAKRFIPTELGEIVHSLVLEFFPDILNIEFTAKMEHDLDSVEDGDV
EWKSIIAEFFKDFEKDIEVAENEMEKVQIKDEPAGEDCEHCGSPMVFKLGRYGKFMACSN
FPECRNTKAIVKHTGVTCPTCKQGEIVERKSKKKRIFYGCERYPECEFVSWDKPIERPCP
KCSSLLVEKKVKKGVQINCVNCDYQEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttttagtgattgtggaatcgccagcaaaggcgaaaacaatcgagcgttat
ctgggaaagaagtataaagtccgcgcgtcactaggacatttacgtgatttgccccgcagc
cagatggctgtggacgttgaaaataattttgaaccccgttatattactattcggggaaaa
ggccctattttgcaggacttgaaaaaagaagcgaaaaaagcgaagaaagtctttctcgcg
gctgaccccgacagagaaggggaagcaattgcatggcatttagctaatgcacttggtgtt
gatctcgactcggattgccgggttgtcttcaatgaaattacaaaagatgctataaaagaa
tcttttaaacaaccgcgcaaaatcgatatggatcttgtcgatgcacaacaggcaagacgt
gttcttgaccgtctagtgggttacagcatcagccctttattgtggaaaaaagtgaaaaaa
ggattatcagccggccgtgtgcaatcagtggctcttcgtctggtcatcgaccgcgaaaac
gaaataaaagaattcgaaccggaagaatactggtccattaccggtgaattcgaaaaagcg
aaaaagaaattcgaagcccagttttacgggaatgcaaatgaaaaaatgaaattggaaaac
gaagacgatgtcaaagcggtaatggcgactatgaaaggcaagaacttcaacgtcaaccgt
gtcgtaaaaaaagagagaaagagaaatccatccccttcttttacaacatcctctctgcaa
caagaagcagcaagaaagttaaacttccgtgccaaaaagactatgatgctggcacagcag
ctgtatgaaggtattgctgtcggcaaagaagggattacgggtttgattacgtatatgcgt
accgattccacccggatttccgatacggccaagcaggatactgtcagattcatcgaagaa
aagtacggttcggattatgtgacgaaaacagctgcagcaaagcaatcctctaaatcccag
gatgcgcacgaagctgttcgccccacaagtgtcatgcggacccctgaatctttgaaaagc
attttatcccgtgatttataccgtctttacaagctgatctgggatcgctttgtagcaagc
cagatgagcccagctgtactggataccgttatggcggaactgcagaacggcgaagcggtg
ttccgcgctaacggttcgcaggtgaaattccctggattcatgaaagtttatgtggaaggc
acagacgataaaacagacgacaaagacaatatcctgcctgaaatggaagaaggagataaa
gtcaaagccgtcgccattgaaccaaaacagcatttcacacagccgcctccacgatttacg
gaagcgcgtctcgttagaacgcttgaagaattgggaataggccgtccttcaacttatgct
ccgacactggataccattcaaaaacggggatacgtaacattggatgcaaaacgttttatc
ccgactgagcttggagaaatcgtccacagcctggtgttggagttcttcccggatatcctg
aatatcgaattcacggccaaaatggaacacgatcttgacagtgttgaagatggagacgtc
gaatggaagagcatcatagccgagtttttcaaagacttcgaaaaagatattgaagtagct
gaaaatgaaatggagaaagtccagatcaaagatgaaccagctggtgaagattgcgaacat
tgcggttcaccgatggtctttaagctgggccgttacggcaaattcatggcctgcagcaat
ttccctgaatgccgcaatacgaaggcgattgttaaacatacgggagtaacttgcccgaca
tgtaaacaaggcgagattgtcgaacgcaagagcaagaaaaaacgcatcttttacggctgc
gagcgttatcctgaatgtgagtttgtatcatgggataaaccgattgagcggccgtgcccg
aaatgcagcagccttcttgtagaaaagaaagtgaaaaaaggcgtacaaatcaattgtgta
aattgtgattatcaggaagaagtacaataa
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