Planococcus halotolerans: DNR44_011005
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Entry
DNR44_011005 CDS
T06390
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
play
Planococcus halotolerans
Pathway
play03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
play00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DNR44_011005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
play03019
]
DNR44_011005
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_011005
Enzymes [BR:
play01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DNR44_011005
Messenger RNA biogenesis [BR:
play03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DNR44_011005
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DNR44_011005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QHJ71112
LinkDB
All DBs
Position
2213347..2214774
Genome browser
AA seq
475 aa
AA seq
DB search
MNLEKTLFDAYGFTSFRPGQKEVIEKILAGQDVIALLPTGMGKSMCYQLPAHLLEGSVLI
VSPLLSLMQDQVAQLKKMGEKSVTALNSFLDPAERSNVLNNLSNYRFIFISPEMLVQPYI
KNRLRDIRISLLVADEAHCISQWGFDFRPDYLRIAEILPVLGHPRVLALTATATAKVTEE
IKNYLDLSDPYVYTHPMDRKNIAYDIRKFTSGNEKLEWLKLFVSANRGPGIIYAGTRKKS
QELSGLLNLAGIRTAFYHGGMEHQDRIFVQQQFQNGELEWVCSTNAFGMGVHIPDISHVI
HYQVPTSIEGYVQEVGRAGRDGSPALATLLYAAGDEELLESLVLDDLPTENEIREIYRNA
DEGTQLVEQGIVRETSMRVISYWKNHLTEQETIYQIEQQKIEKMKQSAKIRKLIFLESCI
REYLMECFDQQLQNKPANCCVNDGLDYNKFLKQRESRAVDLSDTWENRLNAILQC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctggagaaaacattattcgatgcctatggctttacctcatttcgtcccggccaa
aaagaagtaattgaaaaaatcctggcaggccaggatgtcatagccttattgccgacaggg
atggggaaatcgatgtgttatcaacttcccgctcacttgctggaaggaagcgtgctgatt
gtatctcccttactgtcattgatgcaggaccaggtagctcagcttaagaaaatgggggaa
aagtcagtgacagccctcaattcctttcttgaccctgctgagcggtcaaacgttttgaac
aacttgagcaattaccgttttatttttatttctcctgaaatgctggtacaaccttatatc
aaaaatagattgcgtgatatccgcatctcgttgctggtagcggatgaagcccattgtata
tcccaatggggctttgattttcggccggattacctgcggattgctgaaattttgccggta
ctgggccatccgagagttttggcgcttactgccaccgccacggcaaaggtgacagaagag
atcaaaaactatttggacctttctgatccatatgtctacactcatccgatggaccgcaaa
aatattgcatacgatatcaggaagttcactagcggaaatgaaaaactggaatggctgaaa
ttatttgtttcagcgaataggggaccgggaatcatttatgccggcaccagaaaaaaatca
caggaattatcggggttattgaatcttgccggaatccggaccgctttctaccatggaggc
atggagcaccaggaccgtatttttgtgcagcagcagtttcaaaacggcgaactggaatgg
gtatgttcaacaaacgcattcggcatgggcgtccacattcctgacatcagccacgtcatc
cattatcaagttcctacttccatagaaggatatgtgcaggaagtgggcagagcgggaaga
gacggcagtccggcccttgcaaccttattgtatgcagcaggtgacgaagaactccttgaa
agcctggtacttgacgatttaccgactgaaaatgaaatccgtgaaatatatcgaaatgct
gatgaggggactcaattggtcgaacagggtattgtcagggaaacatcaatgagagtgatt
tcctattggaagaatcacttgactgaacaagagacgatttaccagatagaacaacaaaaa
attgaaaaaatgaaacagtctgctaaaataaggaaattaatatttttggaaagctgcatc
agggaatatcttatggaatgttttgatcagcaactccaaaataagccggcgaactgctgc
gtcaatgatggacttgattacaataaattcttgaagcagcgggaaagcagggctgttgat
ttatcagatacatgggaaaaccggttaaatgcgattttacaatgttaa
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