Planococcus halotolerans: DNR44_013180
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Entry
DNR44_013180 CDS
T06390
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
play
Planococcus halotolerans
Pathway
play03030
DNA replication
play03430
Mismatch repair
play03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
play00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DNR44_013180 (holA)
03430 Mismatch repair
DNR44_013180 (holA)
03440 Homologous recombination
DNR44_013180 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
play03032
]
DNR44_013180 (holA)
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_013180 (holA)
Enzymes [BR:
play01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DNR44_013180 (holA)
DNA replication proteins [BR:
play03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DNR44_013180 (holA)
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DNR44_013180 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
PCDH15_12th
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QHJ71522
LinkDB
All DBs
Position
complement(2643646..2644668)
Genome browser
AA seq
340 aa
AA seq
DB search
MITSIWKSIRSGQIDPVYLIIGTESYFIEKTLDLLKSSLTQAGELELSFFDMDEVPVDHA
IDEADTIPFFSDRKLIIAKNASFLKAAERGKEKINHDMKVLEAWLENPPSSSVTVFVAPY
EKLDERKKVVKLMKQHAVVVEAKSLQANDLESWLAHEAKSFGKEISRNAVRKLVEMAGTN
LTLLSSEVEKMSLYLGADGEITEELVEQMTARTLEQDAFKMLQAYLDGNISTALSVYYDL
LRQKEEPVALAALLASQIRFMVHVYYLQKKGYHAQQISKQLKAHPYRVKLLVEKRQQISE
QRLLEVLGDLADIDLQLKTVSGNRERVLEFFLMKRGAKNS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcaatttggaaatcgatacgcagcggtcaaattgaccctgtttatcttatt
ataggcacagaaagttattttattgaaaaaacactggacttgctgaagtccagcctgact
caagcgggagaattggagctgtcattctttgatatggatgaagtgccggtcgatcacgcc
atcgatgaagcggacacgattccgttcttcagtgaccgcaaactgatcatcgcgaaaaat
gcctcttttttaaaagccgctgaacgcgggaaagaaaaaataaatcatgacatgaaagtt
cttgaggcatggctcgaaaatccaccttccagttccgtaaccgtttttgtggcaccatac
gaaaaactggacgaacggaaaaaagtggtcaagctcatgaagcagcatgctgtagtagtg
gaggcaaaatcacttcaggcaaatgatctggaatcctggctggcgcacgaagcaaaatcg
ttcggcaaggaaatcagccggaacgctgtccgcaaattggtggaaatggccggcactaat
cttactttgctgtcttctgaagttgaaaagatgtcactttacctaggggcggatggggag
attacggaagaattggtcgagcagatgactgcccgcacattggaacaggatgccttcaaa
atgctgcaggcctatctggatggcaatatcagcacagcgctcagcgtctactacgatctc
ctcaggcagaaagaggagcctgttgcacttgcagcgctgttggcttcgcaaatccgtttc
atggtgcatgtctattatctccagaagaagggctaccatgcccagcaaatctccaaacag
ttaaaagcacatccgtacagagtgaaactgctcgtcgaaaagcgccagcaaatttccgaa
cagcgcctgctggaagtattgggcgacctggctgatatcgatcttcaattaaaaaccgta
agcggcaaccgtgaacgcgtactggaattcttcttgatgaaacgcggagccaagaacagc
tga
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