Planococcus halotolerans: DNR44_013305
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Entry
DNR44_013305 CDS
T06390
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
play
Planococcus halotolerans
Pathway
play03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
play00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DNR44_013305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
play03400
]
DNR44_013305
Enzymes [BR:
play01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DNR44_013305
DNA repair and recombination proteins [BR:
play03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DNR44_013305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
nSTAND3
UvrD-helicase
AAA_28
AAA_16
AAA_14
HHH_5
AAA
TsaE
DEAD
NPHP3_N
CbiA
AAA_25
AAA_18
AAA_17
NACHT
AAA_5
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QHJ71545
LinkDB
All DBs
Position
complement(2664763..2667261)
Genome browser
AA seq
832 aa
AA seq
DB search
MTGQIDLFQEETQFVLGRPVVSIFHNPQNLFSIAKVKIQQTNTSYAEKEIIVSGYFPELS
MEEEYRFTGAVKNHPRYGIQFQVETFTKEVPETEQGIIHYLSSDMFNGIGRKTAETIVKK
LGRDAIKKILEDPEALDAVPRLSDEKKDTIRSTLQMNLGLERVMIQLNDWGFGPQVGMRI
FQAYREETIDILTKNPFRLIEEIEGIGFQRADELGAKLGLTGSHPDRIKASILHILNQAS
LSEGHVYMDAKTLIPQVKEMLEARQQEEITIEAISKAAIELNEESKVAGEETRLYLPSLY
YSEVGIATKLETLLASQENRDGFPSSEVRKALGEAEERLGVNYAETQVQAIESSLNSSVM
ILTGGPGTGKTTVVRGLVEVYAELHGLSLDPKDYAKKKEPFPIILAAPTGRAAKRLSEST
ELPAMTIHRLLGFNGQEKEEETEKEIEGKLIIIDEMSMVDTWLAHQLLKAVPDDAQIIFV
GDQDQLPPVGPGQVLRDLLESERIPTVELTDIYRQTSGSSIIELAHQMKNGQLPADITAK
TADRSFIKAGAEQIPEVVEKVVKSALAKGHHIKDIQVLAPMYKGPAGIDALNKMIQQMVN
PNTDGKRKELVFGDITYRVKDKVLQLVNQPESNVFNGDMGEVVAIMKASETVEKQDVLVV
SFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFPTVIMPVVRGYMKMLRRNLLYTGITRS
KDFLILCGDPGVFRYGVERTDDTKRMTTLKDRLSLSEPKAAEDNKTGNSAEQPKAAASSP
AAPQKTVEQQKLEEEPVTADTSGPASLTNDNVHAIHPLIGMKGVTPRDFIES
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacaaattgatttatttcaggaagaaacgcaatttgtgcttggtcggccggtc
gtttcaatttttcataacccccagaatcttttctccatcgcgaaagtgaaaatccaacag
accaacacctcctacgcagaaaaagaaattattgtgtccggctattttcccgaactctca
atggaagaggaataccgttttaccggagcggtaaaaaatcatccgcgctatggcatccag
ttccaggtggaaactttcacaaaagaagtgccggagacggagcagggcatcatccattac
ctgtcgagcgatatgttcaacggcatcggcaggaagacggcggaaaccatcgtcaagaaa
ttaggcagggacgccatcaagaaaattctcgaagacccggaagcgctggatgcagtgccg
cgcttgtcggatgaaaagaaagacacgatccgctctacactgcagatgaatcttgggctt
gaacgggtaatgattcagctcaatgactggggattcggtccgcaggtaggaatgcgcatt
ttccaggcctaccgggaagagacgattgacatcctgacgaaaaaccctttccgcctgatc
gaagagattgaaggcatcgggtttcagcgtgccgatgaacttggcgcgaaactgggtttg
acaggcagtcatcccgaccgcatcaaagcatcgatccttcatatattgaaccaggcttct
ctttctgaagggcacgtttatatggatgcgaagacattgattccacaggtcaaggaaatg
ctagaagcaagacagcaggaagaaattacaatcgaagccatttcgaaggccgccattgaa
ttgaatgaagaaagcaaagtcgcgggggaagaaacacgcctttatttgccgtcgctatat
tattcggaagtaggcattgcaacaaaactggaaacgttgctagcatctcaggaaaaccgc
gatggcttcccatcatcagaagtccggaaagcgctaggcgaagctgaagaacgtcttgga
gtcaattatgcggaaacgcaagtccaggcaatcgaatcgagccttaattcatcggtcatg
attttgacaggtgggccaggaaccggtaagacgacagtggtccgggggctagttgaagtg
tatgcggaacttcacggtttgtcgctcgacccgaaagattacgccaagaaaaaagagccg
tttcctattattcttgctgcaccgacgggacgcgcagcaaaacgcctgagcgaatcgacg
gaacttccggcgatgacgattcaccggttactgggctttaacggacaggaaaaagaagaa
gaaacggaaaaagaaatcgaagggaaattgatcatcatcgatgaaatgtcgatggtcgat
acatggctcgcgcaccaattgctgaaagcggtgccggatgacgcccagattattttcgtc
ggcgaccaggatcagctgccgccggtcggacccggccaggtgctgcgtgatcttcttgag
tccgaacggattccgacggttgaattgacggatatctaccgccagacttcaggatcttct
attatagaacttgctcatcaaatgaaaaacggccaattgccggcggatattactgccaag
acagcagaccgttcgttcatcaaagcgggcgccgaacaaataccggaagtggttgagaaa
gtagttaagagcgcacttgccaaaggacatcatattaaagatatccaggttcttgcgccg
atgtacaaggggccagccggaattgacgcgttgaacaaaatgattcagcagatggtcaat
cccaatacagacggtaaacgaaaagaacttgtatttggtgacatcacctaccgcgttaag
gataaagtgctgcagctggtcaatcagccggaaagcaatgttttcaatggcgatatgggc
gaagtggtcgccatcatgaaagcgagtgaaacggtcgagaagcaggacgttctggtcgta
tcgttcgacggcatcgaagtgacgtatcagcgcagcgacctcaatcagctgacattggct
tattgctgttccatccataaatcgcagggctctgaatttccgactgtcatcatgccggtt
gtccgcggctatatgaaaatgctgcgccgcaatctgctctataccggaatcacccgcagc
aaggattttctgatcctttgcggcgatcccggcgtattccgctatggtgtcgaacgcacg
gacgacacaaagcggatgacgacattaaaagatcggctgtcgctgtcagaacctaaagca
gcggaggacaataaaaccggaaattccgctgagcagccaaaagccgctgcatccagtccg
gctgcacctcagaaaacggttgaacagcagaagctggaagaagagccagtgactgcagat
acaagtggaccagcttctctgacgaatgacaatgtgcatgccatccatccgctgatcggc
atgaaaggcgttacgccccgtgatttcatagagtcctga
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