Planococcus halotolerans: DNR44_016295
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Entry
DNR44_016295 CDS
T06390
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
play
Planococcus halotolerans
Pathway
play02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
play00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DNR44_016295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
play03000
]
DNR44_016295
Transcription factors [BR:
play03000
]
Prokaryotic type
Helix-turn-helix
Other families
DNR44_016295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_19
Motif
Other DBs
NCBI-ProteinID:
QHJ72061
LinkDB
All DBs
Position
complement(3255910..3257139)
Genome browser
AA seq
409 aa
AA seq
DB search
MNIGSVIKYYRSKNNMTQSQLADGICSISHLSKIESNTYTPHESTIEALLLKMGVQWKKE
IAKRSRLERQLNDFVTCSLHYDLVEMENQYEKLQLDNDYIQSTDLVNQYELYKFRYYLYI
KDQGRADRQKAMLERMKNSFTDAEAWMHQLFLSLYYTMANKKELAMEYVNSLDGGIQSIP
QKFEGEFYYQKARLLIMHEQYELSAHFAELSVQYFKLNYNYIRLLHAQLLLAINYMRRNL
LVQAAGIFEVLKRNTRLTDQKELYNQTLYNFAELLKTRHDHNQAFDLLTELHGILSKDTY
FYKAVLVSLIETAVEVGADAWQYVRELRDLAEGPEDEYFLLYLNYFEKRNFSQPDLSAYS
EEKMFPFFRKHGYIRESKKIALELAEHFKRVKQWEKAMYYQSYYDRNGG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaatattggttctgtgattaagtattaccgctccaaaaacaatatgacgcaatcccaa
ttggctgatggcatctgctctatttcccatctcagtaaaattgaatcgaatacctacacg
ccgcacgaatcgacgattgaagcactgctccttaaaatgggggttcaatggaagaaggaa
atagcaaaaagaagcaggcttgaacgccaattgaacgatttcgtaacatgttctttgcac
tatgacctggttgaaatggaaaatcagtacgagaaactccagttggacaatgattatatc
cagtcgacagacctggtgaatcaatatgagttatataaattccgttattatttatacata
aaagatcagggccgggctgacaggcaaaaagccatgctggaacgaatgaagaattccttt
acggatgctgaggcatggatgcaccagctttttctgtcgctgtattatacgatggcaaac
aaaaaagagcttgcaatggaatacgtgaactctctggatggaggaatccagagcattccg
caaaaatttgaaggagaattctattatcagaaagcgcgtttgctgattatgcatgagcaa
tatgaattgtcagctcatttcgctgaattatcggtccagtatttcaagttaaactataat
tacatccgtctgctgcatgcccaattgctgctcgcaatcaattatatgcggcgcaacctc
ctggttcaggcagctggcattttcgaagtgctgaaacgcaatacacgactgacagaccaa
aaggaattatacaatcagactttgtataattttgcggaattgctgaaaacacgtcacgat
cataaccaggcctttgatttattgactgaattgcatggaattctgtccaaagatacatat
ttttataaagcggtgcttgtgagcctcattgaaactgcagtggaagttggagcggacgcc
tggcagtacgtacgtgaactgcgggatttggcagagggaccggaagacgaatatttctta
ttatacttaaactacttcgagaaacgaaatttttcccaaccagacctttcggcttattca
gaggaaaaaatgttcccatttttcagaaaacatggttatattagagaaagtaaaaaaatc
gccttggaattggctgaacattttaaacgggtgaagcaatgggaaaaggcgatgtattat
caatcctattatgatagaaacggaggatga
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integrated database retrieval system
