Providencia lanzhouensis: ACIH2S_01060
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Entry
ACIH2S_01060 CDS
T11188
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plaz Providencia lanzhouensis
Brite
KEGG Orthology (KO) [BR:
plaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plaz03400
]
ACIH2S_01060 (phrB)
Enzymes [BR:
plaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACIH2S_01060 (phrB)
DNA repair and recombination proteins [BR:
plaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACIH2S_01060 (phrB)
Prokaryotic type
ACIH2S_01060 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XTS07219
LinkDB
All DBs
Position
complement(233110..234534)
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AA seq
474 aa
AA seq
DB search
MSACHLVWFRNDLRVTDNKALTFACEDPTATVIGVYIATPEQWATHNVSPRQIAFLHQNL
VELQHALAKRGIPLICHTTATFADSVKWLLDFAQQQNATGLYFNHQYELNERLRDEQLRQ
QAQHLNIFTYDDALLLTPGLVTTQKGDMYQVYTPFRRAFLSQLMMSDFRSFPAPKPRGAA
LAVENTPPLFAHQSVEISPQFIAGEQAALAKLRQFCSEYVQDYQRDRDIPAIDGTSQLSP
YLALGVLSPRQCVNRLLAENPQVFDSQESGGFSWLNELIWREFYSHLLVAFPRLCRHQPF
IEWTQHIQWNPDDAVFSAWKSGQTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLVKDLLV
DWRKGEHYFMSQLIDGTLAANNGGWQWSASTGVDASPWFRIFNPTTQGKKFDPQGTFIRE
WLPELRDVPEKFIHEPHTWAESHQVSLNYPMPIVDHKQARLMTLEAFEAGKRAV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcttgtcacttagtttggtttcgcaacgatctacgagtcaccgataataaagcg
cttacctttgcttgtgaggatcctactgccactgtgattggcgtctatattgcgacgcca
gaacagtgggcaactcacaacgtatcaccaaggcaaattgcctttttgcatcaaaacctg
gtggagctacaacacgctttagcgaaacgaggtattcccctgatttgccataccactgcg
acctttgcggattccgtgaaatggttgctggattttgcccaacagcaaaatgccacaggg
ttatatttcaatcaccagtacgagttaaatgagcgcttgcgggatgaacagttacgccag
caggcgcaacatctgaatattttcacctatgatgatgcgctattacttacgccaggttta
gtgacgacgcaaaaaggggatatgtaccaagtctataccccgtttcgccgcgcctttttg
agccaattgatgatgagtgattttcgctcgtttcccgcccccaaaccacggggagcggca
ttagccgttgaaaatacacctccactttttgctcaccaatccgttgaaatttcaccgcaa
tttattgccggagaacaagctgcattagcgaagttacggcagttttgcagcgagtacgta
caagattaccaacgcgaccgagatattcccgccattgatggtactagccaattatccccc
tatttagcccttggagtgctttcgcctcgccaatgtgtgaatcgcttattggcagagaac
ccgcaggtttttgactcccaagaaagtggcggttttagctggctaaatgaattaatttgg
cgagaattttatagtcatctattggtcgcttttccgcgcctttgtcgtcaccagccattt
attgaatggacgcaacatattcaatggaaccctgatgacgctgtattttcggcatggaaa
agtggacaaacaggctacccgatagtagatgccgccatgcgccagctcaaccaaacaggc
tggatgcataaccggctacggatgattgtggcgagttttttagtcaaggatttgctggtc
gattggcgtaaaggcgaacactactttatgagccagttaatcgatggcactttggcggcg
aataatggcggctggcagtggtcagcgtcaacgggggttgatgcctcgccgtggttccgt
atttttaacccaaccactcaagggaaaaaattcgacccacaaggcacgtttatccgcgag
tggcttcccgaacttcgcgatgttcccgagaaatttattcacgaaccccatacatgggct
gaatctcaccaagtctctctgaattatccaatgcctatcgttgaccataagcaagcacgg
ctgatgacgttggaagcatttgaggcaggaaagcgggctgtatag
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