Providencia lanzhouensis: ACIH2S_15340
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Entry
ACIH2S_15340 CDS
T11188
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plaz Providencia lanzhouensis
Pathway
plaz03030
DNA replication
plaz03430
Mismatch repair
plaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACIH2S_15340 (dnaE)
03430 Mismatch repair
ACIH2S_15340 (dnaE)
03440 Homologous recombination
ACIH2S_15340 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plaz03032
]
ACIH2S_15340 (dnaE)
03400 DNA repair and recombination proteins [BR:
plaz03400
]
ACIH2S_15340 (dnaE)
Enzymes [BR:
plaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACIH2S_15340 (dnaE)
DNA replication proteins [BR:
plaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACIH2S_15340 (dnaE)
DNA repair and recombination proteins [BR:
plaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACIH2S_15340 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
XTS06295
LinkDB
All DBs
Position
complement(3264861..3268343)
Genome browser
AA seq
1160 aa
AA seq
DB search
MASPRFIHLRVHSDYSMIDGLAKTAPLVKKVAAMGMPAFAITDFTNLCGLVKFYGAAHGA
GIKPIIGADFYMESEQLGDEVAHLTVLARNNEGYQNLTLLISEAYQKGYGAIGPTIHRDW
LVKHKEGLLLLSGGRKGDVGQFLLRGNQALVDESLAFYQTHFPDAYYLELIRTGRPDEES
YLHAAVELATQRGLPVVATNDVCFIESSDFDAHEIRVAIHDGFTLADPKRPKNYSPQQYL
RTEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPKFPTGDMETEDFLVMRSKEGL
EERLKFLFPDEKVRAERRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLELDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKNLEPIDIAAIPLQDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVNWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGSIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPS
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARQQGGIFKEIFDLCARVDIKKINRRVMEKLIMAGAFDHLGPHRAALMS
SLEDALKAADQHAKAEAIGQGDMFGVLAEAPEQVESSYASVPKWPEQVVLEGERETLGLY
LTGHPITRYLSEIERYTNGLRLKDVNPTPRGQVTTVVGLVLSAKVITTKRGNRIGICTLD
DRSGRLDIMLFSDALDKYQHMLEKDNILIATGQVSFDDFNGGNKMTVRELMDIGEAREKY
ARGLAISLSDKQINDQLLNRLRNALEPHRSGTIPVHLYYQKDDARAKLKFGVVWRVTPVD
PLLNDLRTLLGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctcgttttattcatctacgtgttcacagtgactactccatgattgatggg
ctggcgaaaaccgctccattagtgaaaaaagtcgccgccatgggcatgcctgcatttgcc
atcacggattttactaacctttgtgggttagtgaagttttatggtgcggctcatggtgca
ggtatcaagccgatcattggggctgatttttatatggaaagtgagcaacttggtgatgag
gttgctcacttaacggttctggctcgcaacaacgaaggctatcaaaacctcaccttactc
atctccgaagcttaccaaaaaggttatggcgcaattggtcccacgattcatcgtgactgg
ctcgtcaaacataaagagggtttgctcctgctatcaggcggtcgaaaaggggatgtgggg
cagtttttactccgcggtaaccaagcactagtggatgaaagtttagcgttctaccaaacc
cactttcctgatgcttactatcttgagcttattcgtactgggcgacctgatgaagagagc
tacctacatgctgctgtcgaattagcaactcagcgtggtctgcctgtagtggctaccaac
gatgtctgtttcattgaaagcagcgattttgatgcccatgaaattcgtgtcgctattcat
gatggattcacgttagccgatccgaagcgtccaaaaaattatagtcctcagcaatactta
cgtactgaagaagagatgtgcgagctgtttgccgacatccctgaagcattagaaaatagt
gtagagattgctaagcgctgtaacgtcactattcgtcttggtgaatattttctaccgaaa
ttcccgacaggggatatggaaacggaagactttctggtcatgcgttcaaaagaaggtctg
gaagagcgcctcaaattcctattcccagatgaaaaagtccgagcagaaagacgccctgaa
tatgatgaacgtttagaaatcgaactcaacgttatcaaccaaatgggattccctggctac
ttcttgatcgtaatggagtttatccagtggtcgaaagataacggtgttcctgttggtcca
gggcgaggctcaggtgcgggctctttagtggcttatgcactaaaaatcactgacttagac
ccacttgaacttgacctgctgtttgagcgtttcttgaaccctgagcgggtttcaatgcca
gacttcgacgttgacttctgcatggaaaaacgtgaccaagttattgatcacgttgctcaa
atgtatggtcgggacgcggtatcccagatcattacctttggtacgatggcagcaaaagcc
gttattcgtgacgtgggacgcgtactggggcacccttatggtttcgttgaccgaatttct
aaactggttccccctgacccgggaatgacccttgaaaaagcttttgaagcagaaccgcag
ctgcctgaaatttatgaggcagatgaagaggttaaagcgctaatcgatatggcgcgtaag
cttgaaggggtaacacgtaacgccggtaagcacgccggtggggtagttattgcaccaact
aaaattacggattttgcaccgctctattgcgatgctgaaggtaataaccccgttacacaa
ttcgataaaaacgatgtcgaatatgctggcttggtaaaattcgacttccttggtctgcgt
acgctgaccattattaactgggcattggagatgatcaatgcccgtcgagccaagaaaaat
ttagagccgattgatattgcagctattcctttacaggataagaaaagcttcgacatgttg
cagcgttcggaaaccacggcggtattccaattagaatcccgaggaatgaaggatctgatt
aaacgcctgcaacctgactgttttgaagatatgatcgctctggtggcgttattccgccca
ggtccgctgcaatcggggatggtagataactttatcgaccgtaaacatggtcgtgaagag
atctcatatcctgatgtaaattggcagcacgaatcattaaaacctgttctagagccaact
tatggtattatcctataccaagaacaggttatgcagattgctcaggttttagccggttat
accctcggtggcgcggatatgttgcgtcgtgcgatgggtaaaaagaaacctgaagaaatg
gcaaaacagcgctccgtttttgaggaaggttccatcaaaaacggggtagatggtgagttg
tcgatgaaaatctttgacttggtggaaaaattcgccggttatggatttaacaaatcacac
tccgcagcctacgcgctggtctcgtaccaaacactatggctaaaagcccactatccgtct
gaatttatggctgcagtaatgactgcggatatggataacacggaaaaagtagtcgggctg
gtagatgaatgttggcgtatgggcttgaaagtattgccaccagatatcaatagtgggtta
tatcacttccatgtgaatgatgaaggtgagatagtttacggcatcggcgcaattaaaggc
gttggtgaaggcccaatcgaagcgattattgaagctcgccaacaaggcgggatctttaaa
gaaattttcgatctgtgtgctcgagtggatattaaaaagattaaccgccgtgtgatggaa
aagctgatcatggcaggggcattcgatcatttaggtcctcaccgagcggcactgatgtca
tcccttgaagacgcattaaaagcggcggatcagcatgcgaaagcagaagctatcgggcaa
ggggatatgtttggagtgcttgctgaagcccctgagcaggttgaaagttcttacgcgagt
gtgccgaagtggcctgagcaagtcgtgctagaaggtgagcgcgaaactttgggtctctat
ttgacaggccacccaataacgcgatacttaagtgagatagagcgttatacaaatggtttg
agattgaaagatgtgaacccaacccctcgtggtcaagtgacaactgtggtaggtttagtg
ctctctgccaaagtgatcacaaccaaacgtggaaaccgaattgggatttgcacgctcgat
gatcgttccggtcgtctggatattatgttattttcagatgcgctggataaataccaacat
atgttggaaaaagacaatattttaattgccaccggtcaggtcagctttgatgatttcaat
ggtggtaataaaatgacagtgcgcgaattgatggatatcggagaagcaagggaaaagtat
gcgcgcggccttgcaatttcactgtccgataaacagattaacgatcaattactgaatcgg
cttcgtaatgcgcttgaacctcaccgttcaggcacgataccggttcacttgtattatcag
aaggatgatgccagagctaagcttaagtttggcgttgtttggcgtgtaacacccgtggat
ccccttctgaacgaccttcgaactctgctgggtagtgagcaggtagaattagaatttgac
taa
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