Providencia lanzhouensis: ACIH2S_17760
Help
Entry
ACIH2S_17760 CDS
T11188
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
plaz Providencia lanzhouensis
Pathway
plaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIH2S_17760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plaz03019
]
ACIH2S_17760
03009 Ribosome biogenesis [BR:
plaz03009
]
ACIH2S_17760
Enzymes [BR:
plaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACIH2S_17760
Messenger RNA biogenesis [BR:
plaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACIH2S_17760
Ribosome biogenesis [BR:
plaz03009
]
Prokaryotic type
rRNA helicases
ACIH2S_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
XTS06747
LinkDB
All DBs
Position
complement(3806379..3808355)
Genome browser
AA seq
658 aa
AA seq
DB search
MTTETDMSFADLGLSASILNALSDLGYEKPSPIQQQCIPLLLDGNDVLGMAQTGSGKTAA
FGLPLLHNIDPDLKAPQILVLAPTRELAVQVAEALSDFSKHMNRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIDDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKDPKEIRIQSSITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDADVLSQRRQAKFAEQIQQQLESSDLDQYRSLLAKMSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRGDRRDRNDRNSNGNGFDRAERGD
RGARRERRDVGDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFGTHSTIEL
PKGMPSEVLTHLSRARVLNKPMQMQLIGDAQPFERRGGGERRGGPRREGGSEGGFGAGRR
NDRGGDRDGRRSGGDREGFSGNRRGGNRDGGNRDRGNSAPRQDGTNAAPRRRSSSHNA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgagaccgatatgtcttttgctgatctaggtttatcagcatctattttgaac
gcactaagcgacctgggatacgaaaaaccatctccaatccagcaacaatgtattccattg
ttattggatggtaatgatgtattaggtatggcacaaaccggtagtggtaaaaccgctgca
tttggtttgccattactgcataacatcgatccagatttaaaagctccacaaattttagta
ctggcaccgacacgtgagttagcggtgcaagttgctgaagcactgagcgatttctctaaa
cacatgaaccgcgtcaacgtggttgccttatatggcggtcaacgttatgacgttcaactt
cgtgcattacgccaaggaccacaagtggttgttggtactccaggtcgtttgttagaccac
ctgaagcgcggtactttagatctttctaaactgaaaggcttagtattagacgaagctgat
gaaatgctgcgtatgggcttcatcgatgatgttgaaaacatcatgagccagattccagca
gaacaccaaactgcgctgttctcggcaacaatgccagaaccaatccgtcgtattactcgt
cgctttatgaaagatcctaaagagatccgcattcagtcgagcattactacacgtccagat
atcgctcaaagctactggactgtttacggcatgcgtaaaaatgaagcgctggtgcgtttc
ttagaagctgaagatttcgatgcggcgattattttcgttcgtaccaaaaacgcaacctta
gaagttgcagaagcgctggagcgtaatggctataacagtgcggcactgaatggtgacatg
aaccaagcactgcgtgagcaaacattagagcgcttaaaagatggtcgtttagatatcctg
atcgcaactgacgttgcagcacgtggtctggatgttgagcgtatcagcttagttgttaac
tacgacatcccaatggatgcagaatcttacgttcaccgtatcggtcgtaccggtcgtgcg
ggtcgtgcgggtcgcgcattactgttcgttgagaaccgtgagcgtcgtttactgcgcaac
gttgaacgtacaatgaaactgactattcctgaagtggaattgccagatgctgacgtatta
agccaacgtcgtcaggcgaaatttgctgaacaaatccaacagcaattagaaagcagcgac
ttagatcagtaccgttcactgttagcgaaaatgtctccatctgaagatgtagatatggaa
accttagcagcggcattactgaaaatggctcaaggcgaacgcgctctgatcctgccacca
gatgcaccgcgtcgtccgcgtcgtgaattcaacgaccgtgatgatcgtcgtggcgaccgt
cgtgaccgtaacgaccgcaacagtaacggcaacggttttgaccgtgcagagcgcggcgat
cgtggtgctcgtcgtgagcgtcgtgatgttggcgatatggaaatgtaccgtatcgaagtg
ggtcgtgatgatggtgttgaagttcgtcatatcgttggtgcgattgcgaacgaagcagac
atcagcagccgctacattggtaacatcaaactgtttggcactcactcaactatcgagtta
ccaaaaggtatgccaagcgaagtgttaactcacttaagccgtgcgcgtgttctgaacaaa
ccaatgcaaatgcaactgatcggtgatgctcaaccatttgagcgtcgtggcggtggcgaa
cgtcgtggtggtccacgtcgtgaaggcggcagcgaaggtggtttcggtgcaggtcgtcgt
aatgaccgtggtggcgatcgtgatggtcgtcgtagcggtggtgatcgcgaaggcttcagc
ggcaaccgtcgtggtggaaaccgtgatggtggcaaccgtgaccgtggtaattctgcacct
cgccaagatggcactaatgcagcgccacgtcgtcgtagcagcagccacaacgcataa
DBGET
integrated database retrieval system
