Providencia lanzhouensis: ACIH2S_17780
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Entry
ACIH2S_17780 CDS
T11188
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plaz Providencia lanzhouensis
Brite
KEGG Orthology (KO) [BR:
plaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plaz03016
]
ACIH2S_17780 (truB)
Enzymes [BR:
plaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACIH2S_17780 (truB)
Transfer RNA biogenesis [BR:
plaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACIH2S_17780 (truB)
Prokaryotic type
ACIH2S_17780 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
DUF5955
Motif
Other DBs
NCBI-ProteinID:
XTS06751
LinkDB
All DBs
Position
complement(3812309..3813262)
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AA seq
317 aa
AA seq
DB search
MGRRRSGRNIDGVVLLDKPTDISSNDALQKVRRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQFLLDSDKRYRVIARLGQRTDTSDSHGEIISERDITFTAQQLEEALEHFRGDTLQ
VPSMYSALKHQGRPLYEYARKGITVEREARPITVYELQFIRCDNNELELEIHCSKGTYIR
TIIDDLGEMLGCGAHVTYLRRVQVANYPYDRMVTLEQLAALRAKVDAGEGSFESLLDSLL
LPMDTAVVHFPAVNITEETAAYFKQGQPVRGDVKDLVEGDMIRVTCGSEQRFIGIALISE
DGRIAPKRLVVENEPSA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcgtagcgggcgcaatattgacggcgttgtgctgttagataagcccacc
gatatttcctcaaacgatgcgctgcaaaaagtgcggcgctttttcaacgcaaataaagct
gggcatacgggggcacttgacccactagcgacaggcatgttgccagtctgccttggtgaa
gcgacgaaattctcacagtttttactcgattcagataagcgctatcgggtgattgcacgc
cttggacaacgaacggatacttctgattctcacggcgaaatcatcagtgaacgcgatatc
acttttacggcacagcaacttgaagaagccctcgaacattttcgtggagatacactgcaa
gttccttccatgtattcagcgctgaaacaccaagggcgcccattatatgaatacgcacgt
aaaggtattacggtagagcgtgaagcccgcccaattacagtgtatgaacttcagtttatt
cgttgtgataacaatgaattagaactggaaattcactgttctaaaggcacctatattcga
actatcattgatgatttaggtgaaatgttgggatgtggtgcgcatgtgacttatctgcgt
cgtgtgcaagtcgcaaattatccttatgaccgcatggtcacgttggaacaattagctgct
ttgcgggcaaaagtggatgcgggagaaggctcatttgaatccttactcgattcgctatta
ttgccaatggataccgcagtggttcattttcctgcagtgaatattactgaggaaacagcc
gcgtatttcaaacagggtcaacctgtacgcggtgatgtaaaagacctagtggaaggcgac
atgatccgtgtcacttgtggttcagagcagcggtttatcggtatcgctctgattagtgaa
gatggacgtattgcaccaaagcgcttggtcgttgaaaatgaaccgtccgcataa
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