KEGG   Providencia lanzhouensis: ACIH2S_18065
Entry
ACIH2S_18065      CDS       T11188                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
plaz  Providencia lanzhouensis
Pathway
plaz02024  Quorum sensing
plaz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plaz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACIH2S_18065 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACIH2S_18065 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plaz03019]
    ACIH2S_18065 (hfq)
   03036 Chromosome and associated proteins [BR:plaz03036]
    ACIH2S_18065 (hfq)
Messenger RNA biogenesis [BR:plaz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ACIH2S_18065 (hfq)
Chromosome and associated proteins [BR:plaz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ACIH2S_18065 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: XTS06806
LinkDB
Position
complement(3870208..3870504)
AA seq 98 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARPVSHHSGTGTAGAGNGNYHGGASAGQDGESAE
NT seq 297 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcctgaacgcattacgtcgtgaaagggtt
ccggtctctatttatttagttaatggtattaaattgcagggtcaaatcgaatcttttgac
caatttgttattttgctgaaaaacacagttagccagatggtttataaacacgctatctct
actgtggttccagcacgccctgtttctcatcatagcggtactggtactgctggcgctggc
aatggcaactaccacggtggtgcttctgctgggcaagatggcgaatcagctgagtaa

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